Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1007 ATGAATTCCTCCGAGATCGGAACCAATGGTTTCGTATTCATAGAGTCGAACGACACGCTGCGGGTCTGTTTCAATAGTAGTGCATATCACGGTTCCGCCCTTTGGATAGAGAATTCCGTGGAGAAAACACTCCCTGAGTTTGTTCTGCAATTCGCAATCATACTAGCAATCAACCGATTCTTGCTCCTTGTTTCTGAACAATACCATGTACCTCGTATTGTTGCCAATGTTTTTAACATGTTCCCTTTCAGTAACATGGTACCATTGGAAACCGTGGGAGGGATAGCCCTTGTTTACTACGTGTTTTTTATGGGTTTAAAAATAGATTTGAAACCAATAACAAGGTTGCACAAGAAGGCCATGATTATTGTCATTTCCGGCACAATCTTCACCTTACCAGTAGGGTTCGGCTTGTACTACATGCTCGTCACCGACATGTGGAGAAAATCTTTGTCCCATGTTAATGCTAGTCGAAAGGGTGCAATATTATGGGGAATCGCTCTTTCATGCAGCAACGAGTTTCCCGAGACAGCAAAGATTCTCTCGGACCTTAAACTTCTCATAACGGATAATGGACAACTCGCTCTCACAGCTTCTCTCACGAATGACTTGGTTTCGTGGACACTTCTTGTGTTGGCTCTGTCTCATTTCTACTATGCTTCAGTGTCATCTTTTGTCATAACCGTCGTGATTGTGTTGGTGTGTTTTGTGGCCCTTCACCCGTTCTTCAAGTGGCTGTTCAACAACGTGGGAACCGAGGATCGTGAGTTTCTTGAGTTGCAAGTAATCTTTGTGCTGCACATAGTTTTGGTCATGGGGCTTTTGACTGATGGCTTGGGCGTGCATTCCATCACTGGGGCTTTCTTTCTGGGCGTTGTGATTCCTCAGGGCACGCTCAACAATGCGGTGCAAGACAAGGTTCAGGACTTTGTGGCGGTTTTCATGATGCCTTTGTTCTTTGTGGCAGTTGGGGAGAGGATTCAGATCCAAGACTTGTTGGCCTTGGACACTCATCTTGCAACTGTGGTGGTGGTTGTTTTGTTGGCTTTTGTGGCGAAGATTGTGTGCACTATGGCGGTTTCTTGGTTCTACCTGTTGTCGAAAATGGAAGGGTTGTCCATTGCATTGCTCTTGAATACTAAAGGAATAATGCCATTGATCGTTCTCTGTACCGGCAGGGACAGACGCGAACTGAACAACCAAACCTTTGGGGTGATGCTACTAGCATGCTGGCTAATGACAATTCTCGTGGGACCGATCTCATCCGCTTTAGCAGAAGCCTTGAAAACCGGAAATGTTATGGGAGGCCAACGCAAGAGCATGCAAGACACGCAACTAGACTCACCCCTCAGACTCCTAGCATGCATCCACACAAAACGCGACGCAAATGTGATTATCAACCTCTTAAAAGCCTCATGCCCCTCGGTAAGAACCCCAATCCAAGTTCTAGCGGTAGAACTCAACAAAATGACCAACCGCCCCACCGTGTCACTCATCATAAAAAAAGCTCGAAAACCCTCATTCACCTCAAAGTCCACGAAACACGACACCGAAGACAACCTCTGCAGCTTCGACAACCTCAATCAAGCCATTTTCACAGAAAAAATGAGAATCATGTCAGACTATAGTTCAATGCATGAAGACATCTTAAACCTAGCAAGATGCAGAGGCGTGGCATTAATCTTAACAACGCTCTACAAGCAACCAACCTACGACGGTTTAGGCGCCGGTGTTGCAACGGCAAGAGCAGTGAACATCATCAACCGCGACCTTGCTTGCAAAGACGAGAAAAAAGTGGTGTTAGAGAGTTTAATGAGGGATGCACCGTGTTGCGTGGCTATATTCGTTGACAGAGGGTTGAGCTTGAGTAGTGTCAGTATGAATCATGATTATAAACACTACAAGGAGTTCCGCGTGGCGATGTTTTACGTCGCAGGCGCGGACGATCGGGAGGCGCTGTCCTACTCGTGGAGGATGAGCAGGAGCACGGAGGTGGAGCTGACCGTGGTGAGGCTTGTTTGGGAGAATCCTAACGACGAGTTCGACGAGACCGACGCAGAGTTTATCAAGGGGTTTGTGAACCAGACGGGGGAGATAAGTAGTAGTAAGGTTAGATATTTGGAGAAGACGGTGAGGGACGAGAAGGAGACGGTGAAGCTTTTGAACAAGATGGGGAACAAGGGTTTTGATTTGTATGTGGTGGGGAGGGGCCATGGGAGGAAAATGTCGCTAGCGCAGACGGTGGATCCAGTGCTGGAGGAGCCAGTGTTGGGGCCCCTCGGCGATGCTTTGACGGATCTTAACTCCGCCGCGCAGACATCGATTTTGATTTTCCAGAGACAGGCTCACCAGGTTCTTGAAGGGAAGCATGCCAGGAATGCTTCTGCTTTTGAGATTAAGGTGTATGATAACAAGGCGGAGCAACGGCTGGTGTGCCCTTCTACTACGTTTCCTATGCTTTTAAGTCAAGTGGCTTGA 2478 0.4754 MNSSEIGTNGFVFIESNDTLRVCFNSSAYHGSALWIENSVEKTLPEFVLQFAIILAINRFLLLVSEQYHVPRIVANVFNMFPFSNMVPLETVGGIALVYYVFFMGLKIDLKPITRLHKKAMIIVISGTIFTLPVGFGLYYMLVTDMWRKSLSHVNASRKGAILWGIALSCSNEFPETAKILSDLKLLITDNGQLALTASLTNDLVSWTLLVLALSHFYYASVSSFVITVVIVLVCFVALHPFFKWLFNNVGTEDREFLELQVIFVLHIVLVMGLLTDGLGVHSITGAFFLGVVIPQGTLNNAVQDKVQDFVAVFMMPLFFVAVGERIQIQDLLALDTHLATVVVVVLLAFVAKIVCTMAVSWFYLLSKMEGLSIALLLNTKGIMPLIVLCTGRDRRELNNQTFGVMLLACWLMTILVGPISSALAEALKTGNVMGGQRKSMQDTQLDSPLRLLACIHTKRDANVIINLLKASCPSVRTPIQVLAVELNKMTNRPTVSLIIKKARKPSFTSKSTKHDTEDNLCSFDNLNQAIFTEKMRIMSDYSSMHEDILNLARCRGVALILTTLYKQPTYDGLGAGVATARAVNIINRDLACKDEKKVVLESLMRDAPCCVAIFVDRGLSLSSVSMNHDYKHYKEFRVAMFYVAGADDREALSYSWRMSRSTEVELTVVRLVWENPNDEFDETDAEFIKGFVNQTGEISSSKVRYLEKTVRDEKETVKLLNKMGNKGFDLYVVGRGHGRKMSLAQTVDPVLEEPVLGPLGDALTDLNSAAQTSILIFQRQAHQVLEGKHARNASAFEIKVYDNKAEQRLVCPSTTFPMLLSQVA 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1007 825 Pfam Sodium/hydrogen exchanger family 44 420 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Aed9g1007 825 PANTHER CATION/H+ EXCHANGER 3 18 789 - -
Aed9g1007 825 Gene3D - 45 431 IPR038770 -
Aed9g1007 825 PANTHER CATION/H + ANTIPORTER 18 789 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1007 Aed-Chr9 7240568 7243771 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1007 16 780 Antiporter Super Family AT2G13620 30.147 2.09e-115 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1007 - - gmx:100780176 1236.86