Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0985 ATGCCCTTAGACCTTAAGAGCCTCCCATTTCCCCATACTCATACCTCTCACACAAAACAAAAGCCAAATAATTCTAGCTTCACATTCCAAAACATGGCTTCTTCTCATAGTTTTCATCATGCTTCATCATTAATCATAGTGGCAGTTCTCTTTTTTTGCATGTCATCACATTGTGCTCTTGGCATTGATGGACAAACAGTCGTTGACTCTCCTATGCTAACGCAAAATTTAGGAATCAATCGCACCATCATAGTTGATCTGGATGGCAAGGGAGAGTTTAAATCTGTCCAAGCTGCCATTGATTCAATTCCTGAAGGAAATTCTAAATGGGTTATTGTTCATGTTAGGAAAGGAATATACAGAGAAAAGGTGCACGTACCAGAGAATAAGCCTTATATATTCATGAGAGGGAATGGAAAAGGAAGAACTGCCATAGTTTGGTCTCAAAGCTCTGATGACAACGTGGCTTCTGCCACCTTCAAAGTCGAAGCACATGACTTCATTGCCTTTGGAATTAGCTTCAAGAATGAGGCACCTACGGGGGTTGCGTATACCTCTCAAAACCAATCGGTGGCTGCATTTGTGGCAGCAGACAAAGTGGCATTTTATCATTGTGCATTTTACAGTACTCATAACACTCTCTTCGATTACAAAGGGAGACATTACTATGAGAGTTGTTACATTCAAGGCTCAATTGATTTCATATTTGGCCGTGGCAGAACAATCTTCCATAATGCTGATATATTTGTGGTGGATGACAAAAGGGTAAAGATTAAAGGTTCAGTGACGGCTCAAAATAGAGAAAGTGAAGGTGAGATGAGTGGGTTTATATTCGTGAAGGGCAAGGTTTATGGCATTGGAGGGGTGTACCTAGGAAGGGCAAAGGGTCCTTATTCTAGGGTTATTTTTGCTGAGACTTATCTTTCTATGACCATTGTCCCAGAGGGGTGGACCAATTGGAGCTATGATGGTAGCACAGAAAATCTATTGCATGCGGAGTACAAATGCCATGGACCTGGAGCTTTAACAGAAGGACGTGCTCCTTGGTCGAAACAATTAACTAAGGAAGAAGTTGCTCCGTACATATCTATTGATTACATTGATGGCAAGAATTGGTTGCCAGCGTGGGTGTAA 1134 0.4153 MPLDLKSLPFPHTHTSHTKQKPNNSSFTFQNMASSHSFHHASSLIIVAVLFFCMSSHCALGIDGQTVVDSPMLTQNLGINRTIIVDLDGKGEFKSVQAAIDSIPEGNSKWVIVHVRKGIYREKVHVPENKPYIFMRGNGKGRTAIVWSQSSDDNVASATFKVEAHDFIAFGISFKNEAPTGVAYTSQNQSVAAFVAADKVAFYHCAFYSTHNTLFDYKGRHYYESCYIQGSIDFIFGRGRTIFHNADIFVVDDKRVKIKGSVTAQNRESEGEMSGFIFVKGKVYGIGGVYLGRAKGPYSRVIFAETYLSMTIVPEGWTNWSYDGSTENLLHAEYKCHGPGALTEGRAPWSKQLTKEEVAPYISIDYIDGKNWLPAWV 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0985 377 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 43 376 - -
Aed9g0985 377 PANTHER PECTINESTERASE 67-RELATED 43 376 - -
Aed9g0985 377 SUPERFAMILY Pectin lyase-like 79 375 IPR011050 -
Aed9g0985 377 MobiDBLite consensus disorder prediction 1 26 - -
Aed9g0985 377 MobiDBLite consensus disorder prediction 11 26 - -
Aed9g0985 377 Gene3D - 77 376 IPR012334 -
Aed9g0985 377 Pfam Pectinesterase 83 369 IPR000070 GO:0030599|GO:0042545
Aed9g0985 377 ProSitePatterns Pectinesterase signature 2. 228 237 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0985 Aed-Chr9 7062464 7064852 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0985 80 373 Carbohydrate Esterase AT5G47500 37.500 6.34e-70 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0985 - - gmx:100792967 615.92