Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0983 ATGGGTAGTACTGAAATCATGGGAACCCCAGAAGCAGAAGAGGAAGAAGAGCTTCTGAAGAAGATTGAACGGTTAGAAGCTGGTCACGCTCACCTCAAGCAGGAAATGTCCGACTTCAAGCTCATCCAAGACAACAAGTCTCGTTCCAGGTTCGGTGGTGCTGCCACGTGTAACAAACCCTCTTCTTCTTCTTCTCTGCATCAAAATGGAACCAAGTATCTCAATATCTTGCAGTCAATGGGCCACGCTGTTCATGTATTGGATCTTCAATGTCGTATCATGTACTGGAACCCTACTGCGGAAAGTATGTATGGTTATGCAGCAGAAGAAGTTCTTGGGCAGGATGGGATTGAGATGCTTGTGGATCCTAGGGATTTTGGCTTAGGCAATGATGTGTTCAACCATGTCAAAATGGGAGATAGTTGGAGGGGCCAATTCCCTGTTAAGAATAAGAGAGGGGATAGGTTCTATGCTGTGGCAACCAATACACCTTTCTATGATGATGATGGAAGCTTAGTTGGGGTTATTTGTGTCTCCTGTGATTCAAGGCCCTTCCTTGAGACCGGAATTCCCTTTTCAGGGGTAGAGAATGCCAAACTGGGTTCGGGTTCCAACAGTCGTAGTAGTAGCATTTCGGATAAACTTGGCCTTGACCCTCAGCAGCCACTTCAAGCTGCTCTGGCGTCAAGGATTTCGAATTTGCAGGCCTCAAAGGTGAGTAACAAAGTCAAGTCTAGAATCCGGACGGGAGAAAATAACACCAATCGCGAAGGTGGGAGCGGAGAAAGTCATCAATCTGAGCATAGTTTCTCTGACTGTGTTTCATCTGACCAGAGAGATGATGGTAATTCAAGTGGAGCTAGCACACCCCGAGGAGAGGTGCTAAAATCTCCTTTTGGTGTATTTTCTAATGTTGAAGAGAAATCCCAAGGGAAAACTACGAGAGACTCGGGTGATCAGAGTGAAGGAAAACCTATTCACAAGATCATAACCTCTAAGGCTGAAACATGGATTCAAAAGAAAACATCATCATGGCCATGGAGAGGAAACAGTCAGGAAGGAACTGAGGCAAGGAATGTTCGTGTTGCTTGGCCTTGGTTGCAGGGTGATCAAGAAAATGAGTCAATTAATCAGAAGAATATTTCTTCTGGATTGAAGCCAGAAAGCCAGGCAGGAGAAAGTAATCGATATGCTAATAACGAGGCTTCGGGATCCTGGTCATCGTTTGTTAATGTTAACAGCACAGGTAGTACCAGCAGCTGTGGGAGTGACAGCAGTTGTGCTGCCAATAATAAAGGGGATGTTGACTCTGATTGCTTGGATTATGAAATTTTGTGGGAGGACCTCACAGTTGGAGAACCAATTGGGCAAGGTAGTTCTTGTGGAACTGTATATCACGCTCAGTGGTATGGATCGGATGTTGCCGTCAAGGTTTTCTCAAAGCAAGAATACTCAGATGATTTGCTACTGTCCTTCAGACAAGAGGTGTCTGTGATGAAAAGACTTCGTCATCCAAACATTATTCTCTTTATGGGGGCTGTGACTTCACCTCAACATCTATGCATCGTAACAGAGTTTCTCCCACGCGGAAGCTTGTTTCGTTTGCTTCAGAGAAACATGTCCAAACTTGAGTGGAGACGGCGAGTTCATATGGCCTTGGATATTGCACGAGGTGTAAATTATCTTCATCATTGCAACCCCCCCTATCATCCATCGAGATTTGAAGTCGGTGATTTTGGTCTTTCACGTCTTAAACATGAAACATATCTCACTACTAAGACAGGAAAGGGCACGGTAGGCTCTCATTTGTTGTGGTCCCTTAGATGTTTGATTTGTTTTCTGCTTCAGTGTCAGAATATGTTTCTGATTCTCCAGTTTTTATTCTGCTTTGTAGCCTCAATGGATGGCACCAGAAGTTCTTCGTAA 1926 0.446 MGSTEIMGTPEAEEEEELLKKIERLEAGHAHLKQEMSDFKLIQDNKSRSRFGGAATCNKPSSSSSLHQNGTKYLNILQSMGHAVHVLDLQCRIMYWNPTAESMYGYAAEEVLGQDGIEMLVDPRDFGLGNDVFNHVKMGDSWRGQFPVKNKRGDRFYAVATNTPFYDDDGSLVGVICVSCDSRPFLETGIPFSGVENAKLGSGSNSRSSSISDKLGLDPQQPLQAALASRISNLQASKVSNKVKSRIRTGENNTNREGGSGESHQSEHSFSDCVSSDQRDDGNSSGASTPRGEVLKSPFGVFSNVEEKSQGKTTRDSGDQSEGKPIHKIITSKAETWIQKKTSSWPWRGNSQEGTEARNVRVAWPWLQGDQENESINQKNISSGLKPESQAGESNRYANNEASGSWSSFVNVNSTGSTSSCGSDSSCAANNKGDVDSDCLDYEILWEDLTVGEPIGQGSSCGTVYHAQWYGSDVAVKVFSKQEYSDDLLLSFRQEVSVMKRLRHPNIILFMGAVTSPQHLCIVTEFLPRGSLFRLLQRNMSKLEWRRRVHMALDIARGVNYLHHCNPPYHPSRFEVGDFGLSRLKHETYLTTKTGKGTVGSHLLWSLRCLICFLLQCQNMFLILQFLFCFVASMDGTRSSS 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0983 641 PANTHER SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED 59 598 - -
Aed9g0983 641 MobiDBLite consensus disorder prediction 370 398 - -
Aed9g0983 641 Pfam Protein tyrosine and serine/threonine kinase 449 566 IPR001245 GO:0004672|GO:0006468
Aed9g0983 641 MobiDBLite consensus disorder prediction 239 332 - -
Aed9g0983 641 SMART pas_2 71 138 IPR000014 -
Aed9g0983 641 Gene3D PAS domain 81 183 - -
Aed9g0983 641 Gene3D Phosphorylase Kinase; domain 1 442 527 - -
Aed9g0983 641 Gene3D Transferase(Phosphotransferase) domain 1 529 603 - -
Aed9g0983 641 MobiDBLite consensus disorder prediction 196 217 - -
Aed9g0983 641 SUPERFAMILY Protein kinase-like (PK-like) 439 599 IPR011009 -
Aed9g0983 641 SUPERFAMILY PYP-like sensor domain (PAS domain) 66 181 IPR035965 -
Aed9g0983 641 MobiDBLite consensus disorder prediction 198 217 - -
Aed9g0983 641 Pfam PAS fold 73 178 IPR013767 GO:0006355
Aed9g0983 641 MobiDBLite consensus disorder prediction 309 329 - -
Aed9g0983 641 TIGRFAM sensory_box: PAS domain S-box protein 71 178 IPR000014 -
Aed9g0983 641 ProSiteProfiles Protein kinase domain profile. 449 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0983 641 Coils Coil 15 35 - -
Aed9g0983 641 MobiDBLite consensus disorder prediction 369 398 - -
Aed9g0983 641 CDD PAS 83 181 IPR000014 -
Aed9g0983 641 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 59 598 - -
Aed9g0983 641 ProSiteProfiles PAS repeat profile. 69 125 IPR000014 -
Aed9g0983 641 MobiDBLite consensus disorder prediction 239 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0983 Aed-Chr9 7051847 7057093 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0983 7 598 MAP Kinase Kinase Kinase AT3G06620 51.813 0.0 614
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Aed9g0983 PK_Tyr_Ser-Thr 2.8e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0983 - - gmx:100815858 982.245