Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0975 ATGGCGTTTTGGTGGCCATTGCTCGTCCTAGCACTCGCTTTCGCCATCTGCAAGTTCCTTCTCATTCTCATTCCTCCCAAGGTTCCTTCCATTGATGTCGACGCTTCCGACGTGTTGGACGATGGGAGCCAGGCGCAGGAGAACGGCTTCATATACGTGCCTCCGAGGGGAACGGCACAGCAATCTAGCGGGAAAGTTCAGTGCTATGAGCCTGCTACCATGAAATACTTGGGATATGTTCCTGCATTGACGCAGGATGAGGTCAAGGAGCAAGTGGAAAAAGTACGGAAGGCACAAAAAATGTGGGCGAAGACAAGCTTCAAGAAGAGACGCCAGTTTTTACGTATACTTTTGAAGTACATAATTAAACATCAAGCACTTATATGCGAAATATCTTCGCGTGATACTGGAAAGACAATGGTAGATGCCTCTTTAGGAGAAATAATGACAACGTGTGAAAAGATAAATTGGCTACTGTCAGAGGGTGAGCAGTGCCTAAAGCCTGAATACCGATCCAATGGAAGAGCAATGCTTCATAAGAGAGCAAAAGTAGAATTTCACCCCCTTGGTGTTATCGGTGCGATTGTGTCATGGAACTATCCTTTCCACAATATATTTAACCCTATGTTGGCAGCAGTTTTTTCTGGAAATGGCATTGTGATTAAGATTTCGGAACATGCAAGTTGGTCTGGATGCTTTTACTTCCGAATCATCCAATCAGCTCTTGCTGCCATAGGAGCTCCGGAGGACCTTGTTGAGGTGATAACAGGGTTTGCTGAAACAGGAGAAGCACTGGTATCTTCTGCTGACAAAATCATTTTTGTTGGATCCCCTGGGGTTGGGAAGATGATAATGAGCAATGCTGCTAAGACACTTATCCCGGTAACACTAGAGCTTGGTGGAAAAGATGCATTTATAGTTTGCGAAGATGTAGATGTGGATCATGTTGCTCAAATTGCTGTCAGGGCTGCTCTTCAGTCAAGTGGGCAGAACTGTGCTGGGGCTGAGCGATTTTATGTCCACAAGAATATTTATGCATCCTTTGTCAGTAAAGTTACCAAAATTATAAAATCCGTTACAGCTGCATTTGGACCAATCATGCCAATAATGAAATTTAGCTCTGATGAAGAGGTTGTCAGGCTTGCAAATGACTCAAAATATGGGCTTGGGTGTAACGTTTTCTCAGGCAGTCAGAGTCGAGCTAGGGAGATAGCTTCCCAGATACACTGTGGGCTTGCTGCAGTTAATGATTTTGCATCAACATACATGTGCCAGTCCCTGCCATTTGGGGGTGTGAAAAACAGTGGATTTGGACGATTCAGTGGTGTTGAGGGTTTGCGAGCATGCTGCCTTGTAAAATCTGTTGTTGAAGATAGATGGTGGCCATTCATCAAAACCGTGATCCCGAAGCCTATTCAGTATCCTGTAGCAGAAAATGCATTTGAGTTCCAGCAGTCGCTTGTTGAAACACTATATGGGCTCAGCGTATGGGACCGTTTGCAAGCATTGGTTAACGTGTTGAAAATGCTCACTGAGCAAAGCTCTACAAGTGGCAGCAGAAAAAAGAAAAATGACTAA 1578 0.4461 MAFWWPLLVLALAFAICKFLLILIPPKVPSIDVDASDVLDDGSQAQENGFIYVPPRGTAQQSSGKVQCYEPATMKYLGYVPALTQDEVKEQVEKVRKAQKMWAKTSFKKRRQFLRILLKYIIKHQALICEISSRDTGKTMVDASLGEIMTTCEKINWLLSEGEQCLKPEYRSNGRAMLHKRAKVEFHPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNGIVIKISEHASWSGCFYFRIIQSALAAIGAPEDLVEVITGFAETGEALVSSADKIIFVGSPGVGKMIMSNAAKTLIPVTLELGGKDAFIVCEDVDVDHVAQIAVRAALQSSGQNCAGAERFYVHKNIYASFVSKVTKIIKSVTAAFGPIMPIMKFSSDEEVVRLANDSKYGLGCNVFSGSQSRAREIASQIHCGLAAVNDFASTYMCQSLPFGGVKNSGFGRFSGVEGLRACCLVKSVVEDRWWPFIKTVIPKPIQYPVAENAFEFQQSLVETLYGLSVWDRLQALVNVLKMLTEQSSTSGSRKKKND 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0975 525 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 325 336 IPR016160 GO:0016491
Aed9g0975 525 SUPERFAMILY ALDH-like 63 464 IPR016161 GO:0016491
Aed9g0975 525 Pfam Aldehyde dehydrogenase family 362 455 IPR015590 GO:0016491
Aed9g0975 525 Pfam Aldehyde dehydrogenase family 61 360 IPR015590 GO:0016491
Aed9g0975 525 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 362 489 - -
Aed9g0975 525 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 66 304 IPR016162 GO:0016491
Aed9g0975 525 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 360 - -
Aed9g0975 525 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491
Aed9g0975 525 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 1 360 - -
Aed9g0975 525 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 360 IPR016163 GO:0016620
Aed9g0975 525 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 362 489 - -
Aed9g0975 525 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 363 435 IPR016163 GO:0016620
Aed9g0975 525 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 436 448 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0975 Aed-Chr9 6975866 6982861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0975 313 524 Aldehyde Dehydrogenase Gene Family AT3G66658 64.151 2.95e-89 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0975 - - gmx:100816920 699.893