Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0969 ATGGAAGATTTGTACCATGCCAGTTTCAGTACAGATGACAATTCTAGTTCATCCAACGATAATATTTTTTGGGGTGCTAAGGGACTGAATGAAGTAAGAAAGGTTCAATTTTCTGGAGCAGAAGATCATGAAGTGTATGGGGGAATGGACTCATTTTACTCCAATTTTGAGTTCTTCCCAGATGATCCATCAGAAGAAGGATGCATTCAATCCTCTAATCAACAAAAGTATCCATCATACCATGATTATGGACTATTGGATGATAACCTTCACTTTGACATGGTCTCTCCACCACTACAATTTGAGGCACAATATCCAACCATGGTTCCACTTTGTGACACAACAAAGGACAAGCCACACTCAACTTCTCCTTTAGCCTCACTTGAGATCTTGAAGAGCTATGGCAAGGGCTTCAAGAGGTTATGCAATGAAGAGAAGCCATTTGATGATTTGTCTGTGGCCACAGATGAAGTTATTGGGAGAAAGCTCTCAACTGAAGATGTCATGAGGATAGCAGGAACAAGGTTCATCCAATCATCATCATCATCTTCAGAGTCAGAATCTTTGCATTTCTTGGAAACTCACCCTTTTGGTTTATACTTCTCTGGACTCTCTGGTGAGGAAAAAGAGGATGTGGAACTTGCTGAGTCCCTCTTGGCTTGTGCTGAGAAAGTTGGCCATCAACAGTTTGAACGTGCAAGCAAATTGCTGAGCCATTGTGAATCATTGTCTTGCAAAACCGGGAGCCCCGTTAAGCGTGTTGTTTGTTACTTTGCTGAGGCACTTCGCCAGAGGATAGATATAGAAACAGGAAGAGTTTCATACAAGGATTTGCAAAAGGGTGAGTCATTTGATCCTGAGGAGGAAACCAAGGAACTAAGCCCCACTCTTGTTGCATTTTATGAAAACCTTCCATTTAGTCAAATTTCAGTATTCACTGCAGTTCAAGCTGTAATAGAAGATGTAGCTGAAGCAAAGAAGATTCACATTATTGATCTTGAAATCAGAAAGGGTGCCCAGTGGACTATCCTAATGCAAGCACTTGAGTCAAGACATGAATATCCAATTGAGTTTCTGAAGATAACCGCCGTTGAAAGTGGAACTACTAGACACAGAGCTGAGGACACAGGTAAGAGACTAAAGGATTATGCTCAAGGTTTGAACATACCCTTCTCTTACAACATAGTTATGGTATCAGATATATTAGAATTAGATGAAAGAAAAGATCTTTTTGATATTGATCCTGAAGAAACAATTGCTGTTTATTCTCATTTTGCACTTAGAACCAAGATTCAAAAACCAGACCAGCTTGAAACCATCATGGGAGTGATTAGAACCTTGAGTCCTAATGTGATGGTGGTAACTGAAATTGAGGCAAACCACAATTCAATATCTTTTGTAAACCGTTTCATTGAGGCTCTTTTCTTCTTCAGTGCATTCTTTGATTGCCTTGAGACATGCATGAAAGGGAAGAATGAGAAGAATCGAATGATTATAGAATCACTGTACTTCAGTTATGGAATAAGGAACATTGTGGCTGCAGAAGGAGCAGAAAGAAAGACTAGAAATGTGAAGATTGATGTGTGGAGGGCCTTCTTCTCACGCTATGGAATGGTGGAGAAAGAATTGAGCAAGCTGTATTTGTACTATGCCGGTTTTATCAGTACAGATGACAATTCTAGTTCATCCAATGATTTTTTCTGGGCTAACGAGGGACTGAATGATGTGAGGAAGTTTCAATTTTCAGGAGTAGAAGATCATGGAGAGTTTGGAGAAATTGACTCATTTTACTCTAATTTTGGGATCTTCCCAATTCCAGATGATCCATCAGAAGAAGGGTACCTTTTATCCACTAATCACCAAAAGTATCATCAAATATATGATGATGATGATGATTATGGACAATTGGATGATAACCTTCAGTTTGACATGGTGTCTCCACCACTCCAATTTGATGAACAATATCCAACCATTGTTCCACTATGTGACTCAACAAAGGACAAGCCAAACTCAACTACTCATTTAGCCTCACTTGAGATCTTGAAGAGCTATGGCAAGGGCTTCAAGAGGATGTGGAATGATGATGAGGCTGTGGCCACAGATGAAGTTATTGGGAGAAAGCTCTCAACAGAAGATCTCATGAGGATAGCAGGAACAAGGTTCATCCAATCTTTAGAGTCAGAACCTTTGCCTTTCTTGGAAAATCACCCTTTTAGCTTTTGTTTCTCTGGACTCACTGATGAGGAGAAAGAGGATGTGGAACTTGCTGAGTCCCTCTTGGCTTGTGCTGAGAAAGTTGGCAATCAACAATTTGAACGTGCAAGCAAATTGCTGAGCCATTGTGAATCACTCTCTTGCAAAACTGGGAACCCAGTTAAGAGAGTTGTTCATTATTTCACCGAAGCACTTCGCCAGAGGATAGATAGAAAAACAGGAAAAGTTTCATTTTCATCCAAGGACTTGCAAAAGGGTCAATCTTTTGATCCTGAAGAAGCAGCCAAGGAACTAAACCCTGCTATTGTTGCATTTTATGAAGACCTTCCCTTTTGCAAAGTTGCACAATTCGCTGCAGTTCAAGCCATAGTAGAAGAAGTAACTGAAGCAAAGAATATTCACATTATTGATCTTGAAATCAGAAAAGCTATTGAAAGTGGAACCACAAGACACATAGTTGAGGACACAGGTAAGAGACTAAACGATTTTGCTCAAGGTTTGAACATTCCCTTTGTTTTCAACATAGTTATGGTATCAGACATGTTTCATCCAAGAGAAGATCTTTTTGAGATTGTTCCTGAGGAAACAATTGTTGTTTATTCTCCTTATTGCCTTAGAACCAAGATTCAGCAATCAGACCAACTTGAAACCATCATGAGAGTGATTAGAACCATAAGTCCCCATGTAATGGTTGTGGTTGAAATTGAGGCAAGCCATAACTCTAAGTCTTTTGTGAACCGTTTCATTGAGGCACTTTTCTTCTTCAGTGCATTCTTTGATTGCTTTGAGGCTTGCATGAAAGGGGATGAGAAGAACAGAATGATTATAGAATCAGTGTACTTCAGTCCTGCAATAAGGAACATTGTGGCTGCAGAAGGAGCTGAAAGAAAGCATAGGAATGTGAAGGTTGATGCGTGGAGAGCCTTCTTCTCTCGCTTTGGAATGGAGGAGAAAGAATTGAGCACTTCTTCATTGTACCAAGCTGAATTGGTGGCTAAAAGATCTCCTTGTGGAAATTTTTGCACATTTGAGAAGAATGGTCATTGCCTTCTTATTGGGTGGAAAGGAACACCAATTAACTCTGTTTCTTTTCTTTCATCACTTTCCGATTTTGGTGGAAAGAAAGTATGTTAG 3348 0.3981 MEDLYHASFSTDDNSSSSNDNIFWGAKGLNEVRKVQFSGAEDHEVYGGMDSFYSNFEFFPDDPSEEGCIQSSNQQKYPSYHDYGLLDDNLHFDMVSPPLQFEAQYPTMVPLCDTTKDKPHSTSPLASLEILKSYGKGFKRLCNEEKPFDDLSVATDEVIGRKLSTEDVMRIAGTRFIQSSSSSSESESLHFLETHPFGLYFSGLSGEEKEDVELAESLLACAEKVGHQQFERASKLLSHCESLSCKTGSPVKRVVCYFAEALRQRIDIETGRVSYKDLQKGESFDPEEETKELSPTLVAFYENLPFSQISVFTAVQAVIEDVAEAKKIHIIDLEIRKGAQWTILMQALESRHEYPIEFLKITAVESGTTRHRAEDTGKRLKDYAQGLNIPFSYNIVMVSDILELDERKDLFDIDPEETIAVYSHFALRTKIQKPDQLETIMGVIRTLSPNVMVVTEIEANHNSISFVNRFIEALFFFSAFFDCLETCMKGKNEKNRMIIESLYFSYGIRNIVAAEGAERKTRNVKIDVWRAFFSRYGMVEKELSKLYLYYAGFISTDDNSSSSNDFFWANEGLNDVRKFQFSGVEDHGEFGEIDSFYSNFGIFPIPDDPSEEGYLLSTNHQKYHQIYDDDDDYGQLDDNLQFDMVSPPLQFDEQYPTIVPLCDSTKDKPNSTTHLASLEILKSYGKGFKRMWNDDEAVATDEVIGRKLSTEDLMRIAGTRFIQSLESEPLPFLENHPFSFCFSGLTDEEKEDVELAESLLACAEKVGNQQFERASKLLSHCESLSCKTGNPVKRVVHYFTEALRQRIDRKTGKVSFSSKDLQKGQSFDPEEAAKELNPAIVAFYEDLPFCKVAQFAAVQAIVEEVTEAKNIHIIDLEIRKAIESGTTRHIVEDTGKRLNDFAQGLNIPFVFNIVMVSDMFHPREDLFEIVPEETIVVYSPYCLRTKIQQSDQLETIMRVIRTISPHVMVVVEIEASHNSKSFVNRFIEALFFFSAFFDCFEACMKGDEKNRMIIESVYFSPAIRNIVAAEGAERKHRNVKVDAWRAFFSRFGMEEKELSTSSLYQAELVAKRSPCGNFCTFEKNGHCLLIGWKGTPINSVSFLSSLSDFGGKKVC 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0969 1115 Pfam GRAS domain family 215 545 IPR005202 -
Aed9g0969 1115 Pfam GRAS domain family 756 880 IPR005202 -
Aed9g0969 1115 Pfam GRAS domain family 888 1101 IPR005202 -
Aed9g0969 1115 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 584 1100 IPR005202 -
Aed9g0969 1115 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 584 1100 - -
Aed9g0969 1115 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 38 555 - -
Aed9g0969 1115 ProSiteProfiles GRAS family profile. 205 591 IPR005202 -
Aed9g0969 1115 ProSiteProfiles GRAS family profile. 746 1104 IPR005202 -
Aed9g0969 1115 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 38 555 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0969 Aed-Chr9 6950537 6955463 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0969 208 552 GRAS Transcription Factor Family AT1G66350 32.113 2.69e-46 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aed9g0969 GRAS 1.1e-78 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0969 - - gmx:100798926 914.45