Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0940 ATGGCTGAATCTGATGCTCCCAACCATCTCCGTGATTCTCCCAATCATATTCGTGTACCTCTGCTGCAGAAGTTGCTGGCAGAATTAATAGGTACGTACTTTTTTATCTTAGTTGGCTGTGGCACCATAGTAGTCAACATGGAATATAAGAATATTATTACGCACCCTGGTGTATCAGTTGTTTGGGCTGCAAATCTCATAATTCTGATTTACACATTTGGGCACTTCTCTGGTGCCCATTTCAACCCAGCAATAACAATTGCCCATGCTACCACGAGAAGGTTCCCATTTAAGCTGGTGAGACTTAATTGCTAA 315 0.4222 MAESDAPNHLRDSPNHIRVPLLQKLLAELIGTYFFILVGCGTIVVNMEYKNIITHPGVSVVWAANLIILIYTFGHFSGAHFNPAITIAHATTRRFPFKLVRLNC 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0940 104 Gene3D Glycerol uptake facilitator protein. 2 104 IPR023271 -
Aed9g0940 104 SUPERFAMILY Aquaporin-like 21 100 IPR023271 -
Aed9g0940 104 Pfam Major intrinsic protein 19 98 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed9g0940 104 PANTHER AQUAPORIN NIP2-1 5 98 IPR034294 -
Aed9g0940 104 PANTHER NODULIN-26 5 98 - -
Aed9g0940 104 ProSitePatterns MIP family signature. 80 88 IPR022357 -
Aed9g0940 104 PRINTS Major intrinsic protein family signature 23 42 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed9g0940 104 PRINTS Major intrinsic protein family signature 62 86 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0940 Aed-Chr9 6771472 6771889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0940 7 100 Major Intrinsic Protein MIP AT4G19030 51.064 1.63e-33 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0940 K09874 - gmx:100812577 128.642