LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed9g0938	ATGGAGATGGAGATGGATTCCATGTCTATGTGGGTGGTGGTTGTGGCCATTGCTGGTGCCGTTTTAGTCCTAAGATCTATCCTCAAGAATGTAAATTGGTGGCTCTATGAATCCAAATTGGGTGTGAAGCAGTACTCTTTGCCCCCAGGTGACATGGGTTGGCCCTTCATTGGCAACATGTGGTCCTTCCTCAGAGCTTTCAAGTCCAAGGATCCTGATTCCTTTATCTCCTCCTTTCTCTCCAGATATGGAAGAACTGGAATGTACAAGACCTTGATGTTTGGAAATCCAAGTGTAATTGTGACAACACCTGAAACATGCAAAAGGGTGCTGACAGATGATGATAAATTCACAACTGGTTGGCCTCAATCTACTATAGAGCTCATTGGAAAGAGCTCAGAGAGTGAACCTGTTATGGAGGCTTTGGAGAGGGAATACACAACACTTAATCATGGAGCAAGGAAAAATCTAGTAGCCATATTTCAATCTATTGTGGATGAGAGAAGAAACACAAGGAAGGGACATTTTCCTGGAAAAGCCAAAGATATGATGGATGCTCTAATAGATGTTAAAGATGATGATGGAAGAAAGTTAAGTGATGAAGACGTCATTGATATCATGTTGATGTACTTGAATGCTGGCCACGAGTCTTCGGGACATATTACCATGTGGGCAACCTTCTTCCTGCAAAAGCACCCAGAATATCTCCAGAAGGCTAAGGAAGAACAAGAAGAAATAGTAAGGAGAAGGCCTCCAACACAGAAAGGGTTGACACTTAAGGAAATTCGGGAGATGGATTTTCTTTACAAGGTGATTGACGAAACAATGCGTGTGATTACATTCTCACTAGTGGTCTTTCGGGAGGCAAAATCTGATGTCAATATCAATGGATACACAATTCCAAAAGGTTGGAAAGCACTTGTGTGGTTCAGATCAGTTCACCTTGACCCTGAAATATATCCCAATCCTAAGGAATTTAAGCCTTATAGATGGAATAAAGAACACAAGGCCGGAGAATTCCTTCCCTTTGGAGGAGGAAGTAGATTGTGTCCTGGAAACGATCTTGCAAAGATGGAAATAGCTGTTTTTCTTCATTATTTTCTTCTGAATTATCGGTTTGAACAGCATAATCCTAATTGCTCTGTGAGATACTTACCACACACAAGGCCAGTAGACAATTGCTTGGGAAGGGTCAGGAAATGCTCATCTACAACAACCTGA	1221	0.4185	MEMEMDSMSMWVVVVAIAGAVLVLRSILKNVNWWLYESKLGVKQYSLPPGDMGWPFIGNMWSFLRAFKSKDPDSFISSFLSRYGRTGMYKTLMFGNPSVIVTTPETCKRVLTDDDKFTTGWPQSTIELIGKSSESEPVMEALEREYTTLNHGARKNLVAIFQSIVDERRNTRKGHFPGKAKDMMDALIDVKDDDGRKLSDEDVIDIMLMYLNAGHESSGHITMWATFFLQKHPEYLQKAKEEQEEIVRRRPPTQKGLTLKEIREMDFLYKVIDETMRVITFSLVVFREAKSDVNINGYTIPKGWKALVWFRSVHLDPEIYPNPKEFKPYRWNKEHKAGEFLPFGGGSRLCPGNDLAKMEIAVFLHYFLLNYRFEQHNPNCSVRYLPHTRPVDNCLGRVRKCSSTTT	406

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed9g0938	406	PANTHER	CYTOCHROME P450 26	18	134	-	-
	Aed9g0938	406	PANTHER	CYTOCHROME P450 26	132	401	-	-
	Aed9g0938	406	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	343	352	IPR017972	GO:0005506\|GO:0016705
	Aed9g0938	406	Pfam	Cytochrome P450	144	375	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aed9g0938	406	Gene3D	Cytochrome P450	37	401	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aed9g0938	406	PRINTS	E-class P450 group I signature	350	373	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aed9g0938	406	PRINTS	E-class P450 group I signature	340	350	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aed9g0938	406	PRINTS	E-class P450 group I signature	309	333	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aed9g0938	406	PRINTS	E-class P450 group I signature	222	248	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aed9g0938	406	SUPERFAMILY	Cytochrome P450	43	394	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed9g0938	Aed-Chr9	6741939	6749479	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed9g0938	126	398	Cytochrome P450	AT1G05160	61.775	1.46e-129	380

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed9g0938	K04123		-	gmx:100781238	538.495

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