Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0936 ATGTGCAGCAGCATCTTTGGGCCAATAATCATGGACAATTACCAAGGTGATTTAACTGACATACTCCGAGCCAGTGGTGGAGCATATGGTAGCAGCACAGGAACTTCTTCATCTGATCAATTACCTACTACATCTCATCATCATAATATTCATACTCACAGTACCCTCTCTCATCATAATGATCACTGGCACCAGCAACACTTCTCTTCTTCTTCTGATCCCATCACTACTTTCTCATCTTCTTCTGTGCTAATTCAAGACCCCAGAGGAGGAGGCACCAACTTTGGTGACCCTTTCTCAACCATGAGAGATCCCTTCCTTCAGGAGCTTCACATGCCTTCAGCTTCTGCCTACTTCACTACTGGGGCCTTGCAGGAAGAAGCAGCTCCAACTTTTACTAATACTAATGCTAATACTACTACTGCTGCACACAAGATTATTCTTGAGGAGGAACAACATAGGCCTTGTAAAAACATATTCTCAAACATGATTCAGATCTCTCCCTCTCCCAATGCAAAGTTAACCTATGATTCCGCCACAGCCATGGCACCTTCTCCAAGGCCAATTAAGTCTCCTGTAAATACCTCCAAGGACTGCCTTCTGGACACCACAGGAGTGCAGATCTCATCTCCACGGAATCCGGGTCTTAAAAGAAGGAAGAACCAGGCCAAAAAGGTGGTGTGTATTCCTGCACCAGCAGCTGCAAACAGCAGACAAACTGGAGAGGTAGTTCCGTCTGATTTGTGGGCTTGGAGAAAATATGGTCAGAAACCCATTAAAGGTTCACCTTATCCCAGGGGTTATTACAGATGCAGCAGCTCAAAGGGTTGCTCTGCGAGGAAGCAAGTTGAGAGGAGTAGGAATGATCCAAACATGTTGGTTATCACATACACTTCAGAGCACAACCATCCATGGCCAACTCAAAGAAATGCTCTGGCTGGTTCAACAAGATCACAACCTGCAGCCAGCAAGAACAGTAATGCTGCTTCCAATTCAAAGAATATTTCAGAAGGCTCAAACCCCCAAAAGGGCACAGCAACAAAATCAAAGGATGAAGAGAACAACAGTAGTGAGGGCAATGTGTCCCCAGTTGTGGCAGCTGGGAACTCAGGAAACAGTGTGAAGGAAGAGAATATGGAAGACATTAATGAGAAGCAGCAGCTTGAGATGGATGAGGGAGAGTTCAGTGATGGACTCTCTTACAAGCCTAGTTTGATGGATCAGAGTAGTAATAACCAACATTCTGAGGACTTCTTTGCTGAGTTGGGAGAAATAGAAGCTGACCCACTTGACCTTTTGTTCGCTCAAGGTTTTGGTGCAGGTGATGATCAAAGGGAATCCAAGGCCTTAGATCCATTTCATCTGTTTGACTGGTCAGGAGACAACACCAACACCAACAACACAACTAGTTCATTTGAAGAACCTAATAATAAGAGAAGGATATAA 1446 0.4467 MCSSIFGPIIMDNYQGDLTDILRASGGAYGSSTGTSSSDQLPTTSHHHNIHTHSTLSHHNDHWHQQHFSSSSDPITTFSSSSVLIQDPRGGGTNFGDPFSTMRDPFLQELHMPSASAYFTTGALQEEAAPTFTNTNANTTTAAHKIILEEEQHRPCKNIFSNMIQISPSPNAKLTYDSATAMAPSPRPIKSPVNTSKDCLLDTTGVQISSPRNPGLKRRKNQAKKVVCIPAPAAANSRQTGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRNDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPAASKNSNAASNSKNISEGSNPQKGTATKSKDEENNSSEGNVSPVVAAGNSGNSVKEENMEDINEKQQLEMDEGEFSDGLSYKPSLMDQSSNNQHSEDFFAELGEIEADPLDLLFAQGFGAGDDQRESKALDPFHLFDWSGDNTNTNNTTSSFEEPNNKRRI 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0936 481 MobiDBLite consensus disorder prediction 356 376 - -
Aed9g0936 481 MobiDBLite consensus disorder prediction 28 54 - -
Aed9g0936 481 Pfam WRKY DNA -binding domain 247 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed9g0936 481 MobiDBLite consensus disorder prediction 458 474 - -
Aed9g0936 481 MobiDBLite consensus disorder prediction 299 345 - -
Aed9g0936 481 SMART WRKY_cls 245 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed9g0936 481 MobiDBLite consensus disorder prediction 456 481 - -
Aed9g0936 481 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 15 461 IPR044810 GO:0003700
Aed9g0936 481 MobiDBLite consensus disorder prediction 271 290 - -
Aed9g0936 481 MobiDBLite consensus disorder prediction 28 50 - -
Aed9g0936 481 MobiDBLite consensus disorder prediction 377 396 - -
Aed9g0936 481 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 15 461 - -
Aed9g0936 481 MobiDBLite consensus disorder prediction 299 411 - -
Aed9g0936 481 ProSiteProfiles WRKY domain profile. 240 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed9g0936 481 SUPERFAMILY WRKY DNA-binding domain 243 306 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed9g0936 481 Gene3D WRKY domain 219 299 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0936 Aed-Chr9 6672947 6676716 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0936 1 442 WRKY Transcription Factor Family AT2G34830 42.735 1.83e-92 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed9g0936 WRKY 1.9e-25 CL0274