Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0934 ATGGAACAGTACGAGAAGGTTGAGAAGATAGGCGAGGGAACATACGGCGTCGTTTACAAGGCTCGCGACCGCGTCACCAATGAGACCATCGCTCTCAAGAAGATTCGCCTCGAGCAGGAGGACGAAGGCGTTCCCAGCACCGCCATTCGCGAGATTTCTCTCCTGAAAGAGATGCAACACAGGAACATTGTTAGGTTGCAGGATGTAGTGCACAGTGAGAAGCGACTGTATCTGGTTTTTGAGTATCTGGACTTGGATCTAAAGAAACACATGGATTCTTCTCCAGAGTTTGTGAAAGATCCGCGGCAAGTAAAGATGTTCCTTTATCAAATTCTCTGTGGCATTGCTTACTGTCATTCACATAGAGTTCTTCATCGAGACTTGAAACCACAGAATTTGTTGATAGATCGCCGTACTAATTCACTAAAGCTTGCAGATTTTGGATTGGCTAGGGCATTTGGCATTCCTGTCAGGACATTTACACATGAGGTGGTTACATTGTGGTACAGAGCTCCAGAAATACTGCTTGGATCTCGTCATTATTCTACCCCAGTTGATGTTTGGTCAGTGGGATGTATATTTGCTGAGATGGTAAACCGACGACCTCTATTCCCTGGGGACTCTGAGATTGATGAATTGTTTAAAATATTCAGTAAGAATTTAACCTCATCTTATACTTTGCAGGACTTAGCAACTGTGGTTCAAAATCTTGATGCAGCTGGTCTTAATCTTCTTTCTAGCATGCTTTGCTTGGATCCTAGCAAAAGAATTACTGCCAGGAGCGCTGTGGAGCATGAATACTTCAAAGACATTAAATTTGTGCCCTGA 828 0.4384 MEQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFVKDPRQVKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNRRPLFPGDSEIDELFKIFSKNLTSSYTLQDLATVVQNLDAAGLNLLSSMLCLDPSKRITARSAVEHEYFKDIKFVP 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0934 275 Gene3D Transferase(Phosphotransferase) domain 1 86 273 - -
Aed9g0934 275 PANTHER CYCLIN-DEPENDENT KINASE A-2 1 272 - -
Aed9g0934 275 Gene3D Phosphorylase Kinase; domain 1 1 84 - -
Aed9g0934 275 CDD STKc_CDK1_CdkB_like 4 268 - -
Aed9g0934 275 SMART serkin_6 4 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0934 275 PANTHER CELL DIVISION PROTEIN KINASE 1 272 - -
Aed9g0934 275 ProSiteProfiles Protein kinase domain profile. 4 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0934 275 SUPERFAMILY Protein kinase-like (PK-like) 1 271 IPR011009 -
Aed9g0934 275 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Aed9g0934 275 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Aed9g0934 275 Pfam Protein kinase domain 4 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0934 Aed-Chr9 6654344 6658956 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0934 1 275 Core Cell Cycle Gene Families AT3G48750 76.871 2.17e-167 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Aed9g0934 Pkinase 3.7e-79 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0934 K02206 - gmx:100782865 514.998