Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0929 ATGGAAGCAGCTGAGCCTGCCACCGCTCCACAGTTGGCCCTCGCCGACACAGACATCAACTGGGACAGTTGTTTTTGTTGTCGTGTGTGTGACGTTACTAGGTTGGATAAAACAAAGTTCCACGTCATTGGCGCCATTCTATTCACGGCTCAATCAGCCTTGCTCCATCCAACGGCGGTGGTGAAGACGCGCATGCAGGTGGCGGGGTCGGGGTCCGGGTCGGGGCTCTCCCACGTGCGGGGAATTCTCCGGAGCGACGGCGTTCCGGGGATCTTTAGAGGCTTGGGCACTTCGGCCATCGGTTCGGTGCCGGGTAGGGTCCTGGCTCTCACCTCTCTGGAGGTCTCAAAGGACATTATCTTGAAACACACGCAAGGCACTCGCATTCCAGAAGCTTCCCGCGTTGGTCTCGCTAATGGAGTCGCTGGCATGCTCTCCAATTTGGTTTCATGTGTCTACTTCGTGCCATTGGATGTGATTTGTCAGAGGTTGATGGTACAGGGTCTTCCTGGGACAACGTGTTGTAGAGGGCCCTTTGATGTTGTTCGTAAAGTTGTGGAGGCTGAGGGGTTTCGTGGCTTGTACAGGGGTTTTGGATTAACGGCTCTAACACAGTCCCCTGCTTCTGCACTTTGGTGGGGTTCATATGCTGCTGCACAACACCTCATTTGGAGGAGCTTAGGCTACAAGGATGACACGGGGAACAAACCTTCACATGTGGAAATGGTGACAGTTCAGGCTACTGCTGGGATGGTTGCTGGTGCTTGTTCCTCTATTATCACTACTCCAATAGATACTGTAAAAACGCGTCTTCAGGTTATGGACAACTATGCTTCTGGAAGACCATCAGTACTGAAGACAACAAAGACTCTCATTAAGGAAGATGGATGGTGGGGATTTTACAGGGGGTTTGGACCAAGATTTTTAAACATGTCACTTTATGGAACAACCATGATTGTCACTTATGAACTCATAAGTATGTCACTTCTTGCTTATTTCTTGTTTATGCAAAAGTGTCTTTTTTGCAATCATTCTGAACCTTTTAACCCCTTTTGA 1056 0.4972 MEAAEPATAPQLALADTDINWDSCFCCRVCDVTRLDKTKFHVIGAILFTAQSALLHPTAVVKTRMQVAGSGSGSGLSHVRGILRSDGVPGIFRGLGTSAIGSVPGRVLALTSLEVSKDIILKHTQGTRIPEASRVGLANGVAGMLSNLVSCVYFVPLDVICQRLMVQGLPGTTCCRGPFDVVRKVVEAEGFRGLYRGFGLTALTQSPASALWWGSYAAAQHLIWRSLGYKDDTGNKPSHVEMVTVQATAGMVAGACSSIITTPIDTVKTRLQVMDNYASGRPSVLKTTKTLIKEDGWWGFYRGFGPRFLNMSLYGTTMIVTYELISMSLLAYFLFMQKCLFCNHSEPFNPF 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0929 351 Pfam Mitochondrial carrier protein 245 328 IPR018108 -
Aed9g0929 351 Pfam Mitochondrial carrier protein 43 123 IPR018108 -
Aed9g0929 351 Pfam Mitochondrial carrier protein 138 224 IPR018108 -
Aed9g0929 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 36 119 IPR018108 -
Aed9g0929 351 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 4 326 - -
Aed9g0929 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 241 328 IPR018108 -
Aed9g0929 351 PANTHER OS01G0329400 PROTEIN 4 326 - -
Aed9g0929 351 SUPERFAMILY Mitochondrial carrier 35 324 IPR023395 -
Aed9g0929 351 Gene3D Mitochondrial carrier domain 33 134 IPR023395 -
Aed9g0929 351 Gene3D Mitochondrial carrier domain 135 332 IPR023395 -
Aed9g0929 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 134 222 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0929 Aed-Chr9 6620531 6621857 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0929 34 325 Chloroplast and Mitochondria Gene Families AT5G15640 50.000 1.33e-100 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0929 K15121 - gmx:112997745 570.852