Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0920 ATGATGACTGAATCTGATGTTCCTAATCATGTTCAGAAGTCTCTTCTTCATAAGTTGGTAGCAGAGATGGTTGGAACATACTTGTTGATATTTACAGGGTGTGCTTCTATGATGGTGAACCTTGGCAACGACAAGGCGGTCACACATTTTTGTATTTCCATTGTTTGGGCACTCAGTGTTATGGTTTTAGTATATTTTATTGGTCACATATCTGTTACATTAAGAAACTATGACATCTCGAAATCTCTTATATTCAAGTTCAATTCTTACTAA 273 0.3553 MMTESDVPNHVQKSLLHKLVAEMVGTYLLIFTGCASMMVNLGNDKAVTHFCISIVWALSVMVLVYFIGHISVTLRNYDISKSLIFKFNSY 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0920 90 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 6 76 - -
Aed9g0920 90 Pfam Major intrinsic protein 13 71 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed9g0920 90 Gene3D Glycerol uptake facilitator protein. 1 80 IPR023271 -
Aed9g0920 90 PRINTS Major intrinsic protein family signature 56 80 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed9g0920 90 PRINTS Major intrinsic protein family signature 17 36 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed9g0920 90 PANTHER AQUAPORIN NIP2-1 6 76 IPR034294 -
Aed9g0920 90 SUPERFAMILY Aquaporin-like 15 74 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0920 Aed-Chr9 6505929 6507764 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0920 11 71 Major Intrinsic Protein MIP AT4G19030 57.377 4.41e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0920 K09874 - gmx:100812577 82.0333