Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0903 CTCAAAGAAAGGTACGTAATCTCTCTCTCTCTCTCTCTCTATTTTTTTTTTCTTTTACTTAATTTGACACGTGATTCAAAAATTATTTTACATGCTATATATGCTAACAATTTTACATGTGTTGCTTATTATTATGATCTTATTAAGGTTCTGTCGGAGCGAGCAAATAACAGTGCCCTTCGTCTTGACAATGAAAGAATGCAAAAAGAAAACCTCGTACTGAGTGAGGCATTGAAGAACATAGTTTGCCCCTCCTGTGGGGGTCCACACAGTGACCATGAAAGGCGTCAACTCTGTCTAGAACAACTTCGTCTGGACAATGCTCGTCTACAAGCAGAGCGTGAGAGGTTGTCTAAACTTCTTGTACAGTACATGGATAAACAAGATTCAGAACAAAACTTGGAGTCTCCAATCATAGGAAGATCTCCTATGAATCTTGGTGCTTCAACAAATCAAGATGAAGAAGATACCATGCCAAACCCAGCAGCAGCAACAGGGAGCAAAGTAACCCAAATGGAAAAAGCAATGATGTCAAGGATTGCAGTGGCTGCTAAGGAAGAATTACTCAAGCTTCTTTGCACCAATGAGCCCTTATGGGTCAAGTCTTCAACTGATCATAGATATGTTCTTCATCTTGAATGCTATGAAACGTTCTTTCCAAGGATTAACCACTTCAAGAACTCCAAAGCGAGCGTTGAATCATCAAAAGATTCACGGATTGTCAGAATTAAGGCGATGGAATTAGTTGGCATGCTTTTAAATTCGGAAAACTGGGAAAATCTTTTCTCAACAATTGTTACAAAAGCGCGCACACTCGAAGTACTTGAAAATGGTTCATTAGAAAATCGAACCGGAGCTTTGTTGTTGATGTGTGAAGAGATGCACGTTCTTTCACCTTTAGTTCCATCTCGGGAATTCTACTTCCTTCGCTATTGTAACAAAGTTGATGCTAATGTATGGGTGATAGCAGATGTTTCAGTTGATTGCAAAAACCATGATCCTAACTGTTGGAGGTTTCCCTCTGGATGCATGATTCAGGAAATTTCCAATGGGATGTGCCAGGTTTCTTGGGTTGAACATGTTGAAGTGGATGAGAAGATCCAAACACATAAGCTATTTAAAGATCTTGTTAATACCAATGTTGCATATGGAGCAGAAAGATGGCTTTTGGAACTTCAAAGAATGTGCGAAAAGCTTAGCAGTGTTGAGTCTGATCAATGCATACTTGATTATGACATCCGAGGAGTTATCACTACTCTTGGAGGAAGGATGGGTTTGATGAAGTTTTCTCATCAAATGGTTAAAAGCTTCTATGGGATTTTAAACATGTCAAGTATCAGTGACTTTCCACAATATTTGGCTGATGAAAATTCTGGGATTAGGATCTCTGCTCGAAAAATCACAAACCCAAGCGAGCCAAATCCCACAGTTATAATCACTGCTATTACCTCTTTTCGGTTTCCTATCCCTTCTCAAAATGTTTTTGACTTCTTCAGAGATCCAATGAAACGTGTCAAGTGGGATGCTATGTGTTATGAAAGACCTATGCAGGAGATTGCACGCATATCTACTGGAACCCATTCTAACAACTGTATATCCATTATTCAGGAAGGACAATCTGTTGCAAATGCTCGTGCATCGAGTAGTGGAAATGCTGATGTAAGAACAAGAGGTTCAATATTGACGATGACTTTCCAAATACTGATGAATAATATTCCACCGAGCATGACGATGGAATCTGTGACTGTTGTTAACTCTCTCATCACCACAACAGTCAAAAACATAAATGATGCTTTGATCGGTTCTTCCAATTAG 1815 0.3923 LKERYVISLSLSLYFFFLLLNLTRDSKIILHAIYANNFTCVAYYYDLIKVLSERANNSALRLDNERMQKENLVLSEALKNIVCPSCGGPHSDHERRQLCLEQLRLDNARLQAERERLSKLLVQYMDKQDSEQNLESPIIGRSPMNLGASTNQDEEDTMPNPAAATGSKVTQMEKAMMSRIAVAAKEELLKLLCTNEPLWVKSSTDHRYVLHLECYETFFPRINHFKNSKASVESSKDSRIVRIKAMELVGMLLNSENWENLFSTIVTKARTLEVLENGSLENRTGALLLMCEEMHVLSPLVPSREFYFLRYCNKVDANVWVIADVSVDCKNHDPNCWRFPSGCMIQEISNGMCQVSWVEHVEVDEKIQTHKLFKDLVNTNVAYGAERWLLELQRMCEKLSSVESDQCILDYDIRGVITTLGGRMGLMKFSHQMVKSFYGILNMSSISDFPQYLADENSGIRISARKITNPSEPNPTVIITAITSFRFPIPSQNVFDFFRDPMKRVKWDAMCYERPMQEIARISTGTHSNNCISIIQEGQSVANARASSSGNADVRTRGSILTMTFQILMNNIPPSMTMESVTVVNSLITTTVKNINDALIGSSN 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0903 604 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 49 536 IPR042160 -
Aed9g0903 604 ProSiteProfiles START domain profile. 170 401 IPR002913 GO:0008289
Aed9g0903 604 MobiDBLite consensus disorder prediction 137 166 - -
Aed9g0903 604 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 49 536 - -
Aed9g0903 604 Gene3D - 181 401 IPR023393 -
Aed9g0903 604 SUPERFAMILY Bet v1-like 424 527 - -
Aed9g0903 604 Pfam START domain 180 398 IPR002913 GO:0008289
Aed9g0903 604 CDD START_ArGLABRA2_like 174 397 - -
Aed9g0903 604 SMART START_1 179 398 IPR002913 GO:0008289
Aed9g0903 604 Coils Coil 100 127 - -
Aed9g0903 604 SUPERFAMILY Bet v1-like 170 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0903 Aed-Chr9 6349045 6351913 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0903 48 603 Homeobox Transcription Factor Family AT1G73360 34.472 4.67e-112 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0903 K09338 - gmx:100794552 759.214