Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0893 ATGAAGCCTTTTAGCCTTTTAGTGTTATCTTTATATTTCTTCTCTGTGGTGGGGCAGCTTCCTTCTCAGGACATTTTAGCATTGCTGGAGTTTAAGAAAGGAGTCAAGCATGACCCTACTGGCTATGTCCTCAATTCCTGGAATGAGGAATCCATTGACTTTGATGGATGCCCATCTTCATGGAATGGTGTTCTGTGCAATGGGGGTAATGTTGCTGGGGTTGTCCTTGATAACTTGGGTCTCTCTGCTGAAACTGACCTGAGTGTATTTTCAAATCTCACCAAGCTTGTGAAACTTTCCATGTTCAACAATTCCATATCAGGAACACTACCTGACAGCATTGCTGATTTCAAAAGCCTTGAATTCTTGGATATCTCCAATAACCTCTTTTCCTCATCCTTGCCATTGGGAATTGGTAGGTTAGGCAGCTTGCAGAATCTGTCTTTGTCTGGAAACAACTTCTCTGGCCCAATTCCTGACTCTATTTCAGAAATGGCTTCCATCAAGTCCCTGGATTTGAGCCGCAACTCCTTTTCTGGAGTGCTGCCAGCATCGTTGACTAAGATAACTAGCCTTGTATCTCTTAACTTGTCTCGTAATGGCTTCACTGGCAAAATTCCTAAAGGTTTTGATCTGATTCCTGCTCTTGAAAAGCTTGACTTGCATGGCAATATGCTTGAAGGTAATTTGGATGTTGAATTTATGCTTTTATCAAGTGCCAGCTATGTTGATTTAAGTGAGAACATGCTTTCAAGTTCTGATTCCAAGCAGAAGTTTCTACCGCGAATATCTGAAAGTATTAAGCATCTGAATCTAAGCCACAACAAGCTTACTGGGTCATTGGCTAGTGGAGCTGCCGAACCTGTTTTCGAAAACTTGAAGGTGTTGGATCTCAGCTATAATCAGTTGGATGGAGAATTGCCTGGATTTGATTTTGTTTATGATCTCGAAGTTCTTAGACTTAGCAACAACAAATTTTCTGGTTTTATTCCTAATGGCCTGCTGAAAGGAGACTCTTTGGTTTTAACTGAATTGGATTTGAGCGGCAACAATCTCTCAGGGCCACTAAGTATAATTACATCAACAACACTTCGTTCTCTTAATCTCTCATCAAATGAGTTCATAGGTGATATGCCGCTGCTGACTGGAAGCTGTGTTGTACTTGATCTGTCAAATAACAAATTAGAAGGAAACTTAACCAGAATGTTGAAATGGGGGAATATAGAATTTCTTGATCTCAGTGGGAATCATTTGACGGGGGCCATCCCTGAAGAAACTCCTCAATTTTTGCGATTAAATTATTTGAACCTATCCCACAATTCTCTTAGCAGCTCCCTTCCAAAAGTCTTAACACAGTATCCAAAGCTTAGAGTGCTTGACGTTAGTTTCAACCAGTTAGATGGACTAATTCAAGCTAATCTGCTCACACTGCCAACATTGCAAGAGCTGCATCTTGAAAATAATATGATCTCTGGTGGCATCAAGTTTTCATCTTCTCCTGACCAATCTGATCTTCAGATTCTTGATCTTTCTCACAACCAGCTTAATGGCTATTTTCCTAATGAGTTTGGGTTATTAACTGGCCTGAAAGTGCTAAATATTGCTGGAAATAATTTTTCTGGTTCTCTTCCAACCACCATTGCTGACATGAGTTCATTAGACTCCCTGGATATATCTGAGAATCATTTTACTGGTCCTCTTCCAAATGACATGCCAAAGGGGCTCCAGAACTTTAATGCTTCACAGAATGATCTGTCTGGAGTTGTCCCAGAAGTTCTTAGAAAGTTTCCTAGTTCTTCTTTCTTTCCTGGGAATATCAAGTTACATTTTCCAAATGGTCCTCCTGGATCAACTACTTCACCTGCTGAAAGTTCAAAGAGGAAGCATATGAACACCATTGTTAAAGTAATAATTATAGTGTCATGTGTGGTTGCGCTCTTCATATTAATCTTGCTTGCTGTTTTCATACACTACATACGGATATCAAGATCTCCAGAAGAATATGATACAGGTAAGGATATCCACAGGCGTCATCAACCGATTATCTCGGCTCCAGTTCATACAGCAGACAGGGGTGGTGCTTTGGTTGTTTCAGCTGAGGACCTTGTGACCACATGCAAAGAGTCACCATCGGAGATAATCAGCTCTGATGAAAAAACGGCAGCGGTAACAGGGTTCTCTCCATCAAAACAAAGCCACTTTTCATGGTCACCAGAATCTGGTGATTCATTTACTGGTGAAAGTCTTGCAAGACTAGATACAAGATCACCGGATCGGTTGATTGGAGAGCTGCATTTTCTTGATGATACGATAACATTGACACCTGAGGAGCTCTCGAGGGCCCCAGCTGAAGTTTTGGGAAGAAGTAGTCATGGTACTTCTTACAAGGCAACTCTGGAGAATGGTTTGTTGTTGAGAGTGAAGTGGTTGAGAGAAGGAGTGGCGAAACAGAGAAAAGAATTTGTCAAGGAGACGAAAAAATTTGCAAACATCAGACATCCAAATGTTGTGGGATTGAGAGGATATTATTGGGGTCCTACACAGCACGAGAAGCTTATACTTTCAGATTACATCTCACCGGGAAGTCTTGCAAGTTTTCTTTATGCTGCTTCCAAGAAGCCAATGCCCTCCTTCAAATCAGATGTTTATGCTTTCGGAGTGATACTTTTGGAACTTCTAACCGGAAGGTGTGCTGGTGATGTGATATCTAGTGAGGAGGGAGGGGTTGATCTGACAGATTGGGTGAGATTGCACGTGACAGAAGGCCGAGGCTCAGAATGTTTTGATGGCACATTGATGCCAGAACTGAGCAATCCAGTTGCAGAAAAGGGAATGAAGGAGGTCCTGGGAATAGCTATTCGGTGCATTCGATCCGTTTCTGAAAGGCCTGGCATCAAGACTATATATGAGGATCTTTCTTCTATATAG 2928 0.416 MKPFSLLVLSLYFFSVVGQLPSQDILALLEFKKGVKHDPTGYVLNSWNEESIDFDGCPSSWNGVLCNGGNVAGVVLDNLGLSAETDLSVFSNLTKLVKLSMFNNSISGTLPDSIADFKSLEFLDISNNLFSSSLPLGIGRLGSLQNLSLSGNNFSGPIPDSISEMASIKSLDLSRNSFSGVLPASLTKITSLVSLNLSRNGFTGKIPKGFDLIPALEKLDLHGNMLEGNLDVEFMLLSSASYVDLSENMLSSSDSKQKFLPRISESIKHLNLSHNKLTGSLASGAAEPVFENLKVLDLSYNQLDGELPGFDFVYDLEVLRLSNNKFSGFIPNGLLKGDSLVLTELDLSGNNLSGPLSIITSTTLRSLNLSSNEFIGDMPLLTGSCVVLDLSNNKLEGNLTRMLKWGNIEFLDLSGNHLTGAIPEETPQFLRLNYLNLSHNSLSSSLPKVLTQYPKLRVLDVSFNQLDGLIQANLLTLPTLQELHLENNMISGGIKFSSSPDQSDLQILDLSHNQLNGYFPNEFGLLTGLKVLNIAGNNFSGSLPTTIADMSSLDSLDISENHFTGPLPNDMPKGLQNFNASQNDLSGVVPEVLRKFPSSSFFPGNIKLHFPNGPPGSTTSPAESSKRKHMNTIVKVIIIVSCVVALFILILLAVFIHYIRISRSPEEYDTGKDIHRRHQPIISAPVHTADRGGALVVSAEDLVTTCKESPSEIISSDEKTAAVTGFSPSKQSHFSWSPESGDSFTGESLARLDTRSPDRLIGELHFLDDTITLTPEELSRAPAEVLGRSSHGTSYKATLENGLLLRVKWLREGVAKQRKEFVKETKKFANIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYAASKKPMPSFKSDVYAFGVILLELLTGRCAGDVISSEEGGVDLTDWVRLHVTEGRGSECFDGTLMPELSNPVAEKGMKEVLGIAIRCIRSVSERPGIKTIYEDLSSI 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0893 975 ProSiteProfiles Protein kinase domain profile. 780 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0893 975 Gene3D Ribonuclease Inhibitor 24 136 IPR032675 -
Aed9g0893 975 PANTHER OS07G0626500 PROTEIN 6 868 - -
Aed9g0893 975 SMART LRR_typ_2 550 574 IPR003591 -
Aed9g0893 975 SMART LRR_typ_2 165 188 IPR003591 -
Aed9g0893 975 SMART LRR_typ_2 313 337 IPR003591 -
Aed9g0893 975 SMART LRR_typ_2 290 312 IPR003591 -
Aed9g0893 975 SMART LRR_typ_2 526 549 IPR003591 -
Aed9g0893 975 SMART LRR_typ_2 117 141 IPR003591 -
Aed9g0893 975 SMART LRR_typ_2 429 452 IPR003591 -
Aed9g0893 975 Pfam Leucine rich repeat 505 563 IPR001611 GO:0005515
Aed9g0893 975 Pfam Leucine rich repeat 411 466 IPR001611 GO:0005515
Aed9g0893 975 Pfam Leucine rich repeat 143 201 IPR001611 GO:0005515
Aed9g0893 975 Pfam Protein tyrosine and serine/threonine kinase 784 873 IPR001245 GO:0004672|GO:0006468
Aed9g0893 975 Gene3D Ribonuclease Inhibitor 137 259 IPR032675 -
Aed9g0893 975 ProSiteProfiles Leucine-rich repeat profile. 292 314 IPR001611 GO:0005515
Aed9g0893 975 SUPERFAMILY L domain-like 43 379 - -
Aed9g0893 975 Pfam Leucine rich repeat N-terminal domain 22 67 IPR013210 -
Aed9g0893 975 Gene3D Transferase(Phosphotransferase) domain 1 868 975 - -
Aed9g0893 975 Gene3D Phosphorylase Kinase; domain 1 772 857 - -
Aed9g0893 975 SUPERFAMILY L domain-like 291 593 - -
Aed9g0893 975 PANTHER OS07G0626500 PROTEIN 869 975 - -
Aed9g0893 975 SUPERFAMILY Protein kinase-like (PK-like) 783 972 IPR011009 -
Aed9g0893 975 Pfam Leucine Rich repeat 292 306 IPR001611 GO:0005515
Aed9g0893 975 Pfam Leucine Rich repeat 361 377 IPR001611 GO:0005515
Aed9g0893 975 Pfam Leucine Rich repeat 342 354 IPR001611 GO:0005515
Aed9g0893 975 Gene3D Ribonuclease Inhibitor 260 620 IPR032675 -
Aed9g0893 975 PANTHER - 6 868 - -
Aed9g0893 975 PANTHER - 869 975 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0893 Aed-Chr9 6263058 6267989 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0893 786 870 Receptor kinase-like Gene Family AT3G56370 36.047 1.62e-09 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed9g0893 PK_Tyr_Ser-Thr 7.2e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0893 - - gmx:100793639 1547.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0893 9 6263058 6267989 Aed9g0893 9 6263058 6267989 ECH