Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0890 ATGTCTGAGTCGTTTGCTGACCCTCCGGGGACATTTTCCGGTCACTATCGCCGGAAACCGCTGCAAAACCGGCAAAGAGCTGGTAGTGGAAGTTTTGTCTTTGGCACAAGGCCTACTCCACCTTGGACTCACACCTGTGATAGGTATCTGGAGTGGTTATTAGCCATTGCATTTGTTGGAGGAATAGCTGCTCCTCTGAACTATCGGTGGAGTTTTGAAGAGGCAAGATTAGCAATGGCTGCAGTGAAGCCAGTGTTGTTAGTGATTGATGAGAGCAGCTACACATGGTACTCAAAATTCCAGCAAAATGATGTTCCATCTCTGAAGTGGCATATTTTGTTGGATTCCCCTTCCTTGGATTTTACAAAGTGGAATGGTAGGAACATTACTGTGTTAACTCCCGAAATGCTTAAGAGACATCCTGTGAAGCTTGTACCATTTGATTATTCATGGGCACCTGAAGGTGCTGTCATAATATGCTATACTTCAGGAACTACGGGAAAGCCCAAGGGAGTCACTCTGAGTCATGGAGCTTTGATCATACAATCCCTAGCGAAGATTGCCATAGTTGGCTACAATGAGGATGATGTCTATCTGCATACTGCTCCATTATGTCATATTGGTGGCTTGTCATCAGCCTTGACAATGCTTATGGTTGGAGGTTGCCATGTCTTGATGCCAAAGTTTGATGCAGAATCAGCTGTTGATACCATAGAGCAATATGCAGTGACATCTTTTATCACCGTTCCTGCAATGATGGCCAGTCTGATTTCTATAATTAGGCACAAAGAGACTTGGAAAGGGGGAGAAAATGTCAAGAAAATTCTTAATGGGGCTGGAAGCCTCTCACATAAGCTCATCAAGGACACTAGCATATTCTTCCTCAAAGCTAAACTTATTTCAGCTTATGGGATGACAGAGACATGCTCTTCATTGACATTCCTGACACTCTATGACCCAATGCATGAAAGCACAAACCAGACCCTTCAAGCATTTGCTGTGGCAGGATCTAAGCTCATTCACCAGCAACAAGGTGTTTGTGTTGGCAAGGCTGCACCCCATATAGAACTGAAAATAAGTGCTGATGCTTCTGGTCACATTGGGAGGATTCTAACTAGAGGACCACATATAATGATCAGGTATTGGGACCAAACTCTCACAAATCCATTAAATCCGAATAATGAAGCCTGGCTTGACACAGGTGACATTGGATCAATTGATCATTATGGTAATTTGTGGCTCCTTGGTCGAACAAATGGTCGAATCAAGAGTGGTGGGGAGAACATTTACCCTGAAGAGGTTGAGGCAATTCTACAACAACATCCAGGGATTGCAAGTGTTGTAGTTGTGGGAATCCCAGATGCTCACCTAACAGAGATGGTAGCCGCATGTATCCAACTTAAAGAAAATTGGCAATGGTCAGAGCAGTTGTATACTTCAAATGAAGAGTTTCACCTATCTAGAAAGAACATTCAACAACATTGTATAGAAAAACATTTAAGCAGGTTTAAGGTACCAAAAATGTTTATTGTATGGAGGAAGCCATTTCCACTCACTACAACAGGGAAAACAAAAAGAGATCAAGTGAGAAAGGAAGTTATGTCTCAACTACAATCTTTTCATAGTAATCTTTGA 1635 0.4251 MSESFADPPGTFSGHYRRKPLQNRQRAGSGSFVFGTRPTPPWTHTCDRYLEWLLAIAFVGGIAAPLNYRWSFEEARLAMAAVKPVLLVIDESSYTWYSKFQQNDVPSLKWHILLDSPSLDFTKWNGRNITVLTPEMLKRHPVKLVPFDYSWAPEGAVIICYTSGTTGKPKGVTLSHGALIIQSLAKIAIVGYNEDDVYLHTAPLCHIGGLSSALTMLMVGGCHVLMPKFDAESAVDTIEQYAVTSFITVPAMMASLISIIRHKETWKGGENVKKILNGAGSLSHKLIKDTSIFFLKAKLISAYGMTETCSSLTFLTLYDPMHESTNQTLQAFAVAGSKLIHQQQGVCVGKAAPHIELKISADASGHIGRILTRGPHIMIRYWDQTLTNPLNPNNEAWLDTGDIGSIDHYGNLWLLGRTNGRIKSGGENIYPEEVEAILQQHPGIASVVVVGIPDAHLTEMVAACIQLKENWQWSEQLYTSNEEFHLSRKNIQQHCIEKHLSRFKVPKMFIVWRKPFPLTTTGKTKRDQVRKEVMSQLQSFHSNL 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0890 544 Gene3D - 41 418 IPR042099 -
Aed9g0890 544 Pfam AMP-binding enzyme C-terminal domain 433 523 IPR025110 -
Aed9g0890 544 Gene3D - 421 541 IPR045851 -
Aed9g0890 544 SUPERFAMILY Acetyl-CoA synthetase-like 45 536 - -
Aed9g0890 544 PANTHER ACYL-COA SYNTHETASE FAMILY MEMBER 2, MITOCHONDRIAL 33 535 - -
Aed9g0890 544 CDD AFD_class_I 159 523 - -
Aed9g0890 544 Pfam AMP-binding enzyme 44 424 IPR000873 -
Aed9g0890 544 PANTHER ACYL-COA SYNTHETASE 33 535 - -
Aed9g0890 544 MobiDBLite consensus disorder prediction 1 33 - -
Aed9g0890 544 ProSitePatterns Putative AMP-binding domain signature. 159 170 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0890 Aed-Chr9 6234724 6239873 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0890 159 539 Monolignol Biosynthesis Gene Families AT4G19010 28.283 2.15e-34 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0890 K14760 - gmx:100809925 936.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0890 9 6234724 6239873 Aed9g0890 9 6234724 6239873 ECH