Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0884 ATGGCACTTTCTATGCACAAGGACTCAGCCAACAACCAGATGGACTCAAGCAAGTATGTGAGGTACACACCAGAGCAGGTTGAGGCTCTGGAGAGGGTCTATGCTGAATGCCCTAAGCCAAGTTCCCTGAGGAGGCAGCAACTCATCAGAGAGTGCCCCATACTTTGCAATATTGAACCTAAACAGATCAAAGTTTGGTTTCAAAACAGAAGGTGTCGTGAGAAGCAGAGGAAGGAAGCCTCTCGGCTGCAGACAGTGAACAAAAAGCTGTCTGCAATGAACAAACTGTTAATGGAGGAGAATGACCGTTTGCAGAAGCAGGTTTCTCATCTTGTTTATGAGAATGGATACATGAAGCAACAGATACATACTGCATCTGCTGGTACTACCACGGACAATAGCTGTGAGTCTGTGGTAATGAGTGGTCAAAATCAGCAGCAGCAAAACCCAACACCTCAGCATCCCAACAGGGATGCTAACAACCCAGCTGGTCTTCTCGCCATAGCTGAGGAGACCCTGGCAGAGTTCCTTTCCAAGGCTACTGGAACTGCTGTCGACTGGGTCCAGATGATTGGGATGAAGCCTGGTCCGGATTCGATTGGAATCGTTGCTGTTTCCCGCAACTGTAGTGGCGTGGCAGCACGAGCCTGCGGCCTTGTGAGCCTAGAGCCCACTAAGGTTGCTGAGATTCTCAAAGATCGGCAGTCGTGGTATCGTGACTGCCGGTGCGTCGATGTTTTAAGTATAGTCCCCACTGGAAATGGGGGCACTATAGAGCTCACGTACATGCAGACATATGCGCCCACAACATTGGCAGCAGCACGGGACTTCTGGACACTAAGATACACGACAAGTTTGGAAGATGGAAGTCTTGTGATATGTGAGCGATCATTGACAACCTCAACTGGTGGCCCCACAGGGCCTCCTTCTACAACCTTTGTAAGAGCTGAAATGCTTCCTAGTGGCTTTCTTATTAGACCGTGTGAGGGTGGTGGATCCATTATTCATATTGTCGATCATATCGATTTAGATGTCTGGAGTGTCCCTGAAGTACTGAGGCCCCTTTATGAATCATCAAAAATCTTGGCTCAGAAATTGACCATTGCTGCCTTGCAACATATAAGACAGATAGCACAAGAATCAAGTGGAGAAATTCAGTATGGTGGGGGACGCCAGCCTGCTGTATTGAGAACATTTAGCCAGAGACTTTGCAGGGGCTTTAATGATGCTGTGAATGGATTTGTTGATGATGGTTGGTCACTGATGGGTACTGATGGGGTGGAAGATGTGACTATAGCCATAAACGCATCTCCAAACAAATTTTTGGGCTCCAATTACAATGCTTCAATGTTCCCAGCATTTGGAGGTGGGGTCTTGTGTGCCAAGGCATCGATGCTCTTGCAGAATGTTCCTCCTGCTTTGCTTGTTCGATTTTTGAGGGAGCATCGATCAGAGTGGGCTGATTATGGAGTTGATGCATACTCTGCTGCATGCCTTAAAGCTAGTCCCTATGCAGTTCCTTGTGCAAGACCTGGTGGCTTCCCCAGCACCCAGGTCATTTTACCTCTTGCTCATACCATTGAGCATGAAGAGTTCCTGGAGGTAGTTCGAATAGAGGGTCATGCATTTTCTCCTGAGGACGTTGCGTTGGCACGCGATATGTATCTTTTGCAGCTGTGCAATGGAGTTGATGAAAATGCAATTGGGGCATGTGCTCAGCTTGTGTTTGCACCTATTGATGAGTCCTTTGCTGATGATGCTCTCTTACTGCCATCTGGTTTTCGTGTCATTCCATTGGATCCTAAATCAGATGGTTCAGCTGCAACTAGGACATTAGATTTGGCATCAACAATGGAAGTAGGATCCGGTAATGCTCGTCCAGCCGGAGAAGCGGATTTGAATGGATACAACCTTCGGTCGGTCCTTACTATTGCTTTCCAATTTACCTTTGAGAACCATACACGGGACAATGTGGCTGCTATGGCTCGCCAGTATGTGCGTAGTGTTGTTGGTTCAGTTCAGAGGGTAGCCATGGCTATTGCTCCCTCCAGGCTCAGTACTCAGCTGGGGCCAAAGTCACTTCCTGGTTCGCCGGAGGCCGTTACCTTAGCAAGATGGATCTGTAGAAGCTACAGGATTCACAGTGGCTCAGAGCTTTTCAAAGTTGAGTCCACAGCTGGTGATGCAATCTTGAAGCAACTTTGGCACCATTCTGATGCAATCATGTGCTGTTCTGTGAAAACAAATGCATCTCCAGTGTTCACCTTTGCGAACCAAGCTGGTTTAGACATGCTTGAAACTACTCTTGTTGCCCTTCAAGATATAATGCTTGATAAAGTTCTTGATGAATCTGGCAGGAAGATTCTTTGCTCTGAGTTCTCCAAGATAATGCAACAGGGTTTTGCATATCTCCCAGCAGGAATATGTGTATCTAGTATGAATCGGCCAGTGTCCTATGAGCAGGCTATTGCATGGAAAGTCCTGAATGATGATGATTCTAATCACTGCCTAGCCTTCATGTTCGTGAATTGGTCTTTTGTATGA 2544 0.4713 MALSMHKDSANNQMDSSKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILCNIEPKQIKVWFQNRRCREKQRKEASRLQTVNKKLSAMNKLLMEENDRLQKQVSHLVYENGYMKQQIHTASAGTTTDNSCESVVMSGQNQQQQNPTPQHPNRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRQSWYRDCRCVDVLSIVPTGNGGTIELTYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTTSTGGPTGPPSTTFVRAEMLPSGFLIRPCEGGGSIIHIVDHIDLDVWSVPEVLRPLYESSKILAQKLTIAALQHIRQIAQESSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSLMGTDGVEDVTIAINASPNKFLGSNYNASMFPAFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSAACLKASPYAVPCARPGGFPSTQVILPLAHTIEHEEFLEVVRIEGHAFSPEDVALARDMYLLQLCNGVDENAIGACAQLVFAPIDESFADDALLLPSGFRVIPLDPKSDGSAATRTLDLASTMEVGSGNARPAGEADLNGYNLRSVLTIAFQFTFENHTRDNVAAMARQYVRSVVGSVQRVAMAIAPSRLSTQLGPKSLPGSPEAVTLARWICRSYRIHSGSELFKVESTAGDAILKQLWHHSDAIMCCSVKTNASPVFTFANQAGLDMLETTLVALQDIMLDKVLDESGRKILCSEFSKIMQQGFAYLPAGICVSSMNRPVSYEQAIAWKVLNDDDSNHCLAFMFVNWSFV 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0884 847 CDD homeodomain 18 78 IPR001356 GO:0003677
Aed9g0884 847 SUPERFAMILY Homeodomain-like 18 80 IPR009057 -
Aed9g0884 847 Pfam START domain 168 375 IPR002913 GO:0008289
Aed9g0884 847 CDD START_ArGLABRA2_like 162 378 - -
Aed9g0884 847 SUPERFAMILY Bet v1-like 168 379 - -
Aed9g0884 847 MobiDBLite consensus disorder prediction 124 158 - -
Aed9g0884 847 CDD bZIP 70 109 - -
Aed9g0884 847 Gene3D - 186 379 IPR023393 -
Aed9g0884 847 SMART HOX_1 15 81 IPR001356 GO:0003677
Aed9g0884 847 Coils Coil 87 107 - -
Aed9g0884 847 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677
Aed9g0884 847 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 5 847 IPR044830 GO:0003700
Aed9g0884 847 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 5 847 - -
Aed9g0884 847 MobiDBLite consensus disorder prediction 124 161 - -
Aed9g0884 847 Pfam MEKHLA domain 702 846 IPR013978 -
Aed9g0884 847 SMART START_1 167 377 IPR002913 GO:0008289
Aed9g0884 847 ProSiteProfiles START domain profile. 158 359 IPR002913 GO:0008289
Aed9g0884 847 Gene3D - 9 84 - -
Aed9g0884 847 Pfam Homeodomain 18 76 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0884 Aed-Chr9 6200333 6205805 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0884 5 847 Homeobox Transcription Factor Family AT2G34710 80.496 0.0 1416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aed9g0884 START 1.3e-50 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0884 K09338 - gmx:100779499 1630.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0884 9 6200333 6205805 Aed9g0884 9 6200333 6205805 ECH