Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0878 ATGATAATGAGGTCCCTCTTCACAGTGAAAGTAGCTCTGTGCTGTGTAGTGGTTATACTTAGTGGAGCATCACTACTACCCTCCTCAGATGCACAGCTGGATAACTCATTTTACAGGGACACGTGTCCAAGAGTGCATTCTATTGTCCGTGAAGTTCTCAGAAATGTTTCCAAATCTGATCCTCGCATTCTTGCCAGTCTCATGAGGCTTCACTTTCACGATTGTTTCGTTCAAGCTCATGGCCCTGACTGGAAAGTTCCACTAGGAAGAAGAGATAGTTTGACTGCAAACTTTTCTCTTGCTCTTCAAAATCTTCCCCATTTCAATTTCACCCTTGAGGAACTCATAACTAATTTTAGAAGGCAAGACCTCAATGTTACTGATCTAGTTGCATTGTCAGGTGCTCATACAATTGGCAGATCTCAATGTAGATTTTTCTCTCACAGAATATACAATTTCAGTGGCAGTGGCAATCGTGACCCTACTCTCAACACTAGTCTTTCACAAGCACTTCAAGCAATATGTCCCAATGGTGGAAGTGGAACCAATCTCACCAATTTGGACCTAACCACTCCTGATACACTTGACTCAAAATACTACTCCAATCTTCAACTCCAAAATGGTTTGCTTCGGAGTGATCAAGTGTTGTTTTCCACAAGTGGTGCAGAAACCATTGCCATTGTCAATAGCTTCAGTAGCAACCAAACTCTTTTCTATGAACATTTTAAGGCGTCAATGATTAAAATGAGCATCATTCAAGTGCTAACGGGTTCACAAGGAGAAGTTAGAAAACAATGTAACTTTGTGAATGGGGATTCTTCTAATCTGGCTACTCTAGCCACCAAGGAATCTTCAAAGGGTGCTATGGTGAGCTCAATCTAA 882 0.4138 MIMRSLFTVKVALCCVVVILSGASLLPSSDAQLDNSFYRDTCPRVHSIVREVLRNVSKSDPRILASLMRLHFHDCFVQAHGPDWKVPLGRRDSLTANFSLALQNLPHFNFTLEELITNFRRQDLNVTDLVALSGAHTIGRSQCRFFSHRIYNFSGSGNRDPTLNTSLSQALQAICPNGGSGTNLTNLDLTTPDTLDSKYYSNLQLQNGLLRSDQVLFSTSGAETIAIVNSFSSNQTLFYEHFKASMIKMSIIQVLTGSQGEVRKQCNFVNGDSSNLATLATKESSKGAMVSSI 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0878 293 PANTHER PEROXIDASE 72-RELATED 9 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed9g0878 293 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed9g0878 293 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed9g0878 293 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed9g0878 293 Gene3D Peroxidase, domain 2 106 249 - -
Aed9g0878 293 PRINTS Plant peroxidase signature 214 226 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed9g0878 293 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed9g0878 293 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed9g0878 293 ProSiteProfiles Plant heme peroxidase family profile. 32 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed9g0878 293 PANTHER PEROXIDASE 72-RELATED 77 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed9g0878 293 Gene3D - 32 79 - -
Aed9g0878 293 Gene3D - 80 270 - -
Aed9g0878 293 PANTHER PEROXIDASE 9 78 - -
Aed9g0878 293 SUPERFAMILY Heme-dependent peroxidases 32 270 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed9g0878 293 PANTHER PEROXIDASE 77 278 - -
Aed9g0878 293 Pfam Peroxidase 79 233 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed9g0878 293 ProSitePatterns Peroxidases proximal heme-ligand signature. 128 138 IPR019793 -
Aed9g0878 293 CDD secretory_peroxidase 32 269 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0878 Aed-Chr9 6145225 6148908 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0878 16 79 Peroxidase AT5G06730 50.000 9.42e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0878 K00430 - gmx:106796332 353.599