Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0877 ATGAGGTATCTTGGTGTTGTAGTGATAGGCTTAGTGGTTGTGCTTGGAGGGTTACCCTTTTCCTCAGATGCACAACTAGATCCCTTCTTTTACAAGCACACATGTCCCCAAGTGCATTTTATTGTATTTAAAGTCGTTGAGAAAGTTTCAAGAACCGACACACGTATGCCTGCCAGTCTCGTCAGGCTTTTCTTTCATGACTGTTTTGTTCAAGCTCATGGTCCTTGTTTGAAATTTCCCTTGGGAAGGAGGGACAGTTTAACAGCAAACCGAACCCTTGCAAATCAAAACCTTCCTGCTCCTTTCTTCAACCTCACACAACTTAAAGCAGCCTTTGCTGTTCAAGGTCTTGACACTACTGATCTTGTTGCACTCTCAGGTGCTCATTCATTTGGCAGAGCTCACTGCCTTTTCATACTTGACCGATTGTACAACTTCAGTGGAACTGGCAAACCCGATCCAACTCTTGACACAACTTACTTACAACAATTGCGCCAAATATGCCCCCAAGGTGGACCAAACAACCTCGTCAATTTTGACCCAACCACTCCTGACACATTGGACAAGAACTACTTTTCCAATCTTAAGGTTAAGAAGGGGTTGCTTCAGAGTGATCAAGAGTTGTTCTCAACACCCGGTGCTGACACAATCCCCATTGTCACCAAATTCAGCAGTGACCAAATAGCCTTCTTTAAGAGCTTTTCGGCTTCAATGATTAAAATGGGAAACATTGGTGTGCTAACTGGGAAGAAAGGAGAAATCAGAAAACAGTGTAATTTTATTAACAAGAAATCTGTTGAACTTGGTATAGGTAGTGTGGCATCAGAATCAGAGGAGGGTGTGGTTAGCTCAATATAA 858 0.4277 MRYLGVVVIGLVVVLGGLPFSSDAQLDPFFYKHTCPQVHFIVFKVVEKVSRTDTRMPASLVRLFFHDCFVQAHGPCLKFPLGRRDSLTANRTLANQNLPAPFFNLTQLKAAFAVQGLDTTDLVALSGAHSFGRAHCLFILDRLYNFSGTGKPDPTLDTTYLQQLRQICPQGGPNNLVNFDPTTPDTLDKNYFSNLKVKKGLLQSDQELFSTPGADTIPIVTKFSSDQIAFFKSFSASMIKMGNIGVLTGKKGEIRKQCNFINKKSVELGIGSVASESEEGVVSSI 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0877 285 ProSitePatterns Peroxidases proximal heme-ligand signature. 121 131 IPR019793 -
Aed9g0877 285 Gene3D - 74 262 - -
Aed9g0877 285 PANTHER PEROXIDASE FAMILY PROTEIN 7 71 - -
Aed9g0877 285 SUPERFAMILY Heme-dependent peroxidases 25 262 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed9g0877 285 PANTHER PEROXIDASE 72-RELATED 70 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed9g0877 285 Pfam Peroxidase 72 225 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed9g0877 285 Gene3D Peroxidase, domain 2 99 241 - -
Aed9g0877 285 ProSiteProfiles Plant heme peroxidase family profile. 58 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed9g0877 285 CDD secretory_peroxidase 25 261 IPR033905 GO:0004601|GO:0042744
Aed9g0877 285 PANTHER PEROXIDASE FAMILY PROTEIN 70 271 - -
Aed9g0877 285 Gene3D - 25 73 - -
Aed9g0877 285 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed9g0877 285 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed9g0877 285 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed9g0877 285 PRINTS Plant ascorbate peroxidase signature 115 136 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aed9g0877 285 PRINTS Plant ascorbate peroxidase signature 73 85 IPR002207 GO:0004601|GO:0006979|GO:0020037
Aed9g0877 285 PANTHER PEROXIDASE 72-RELATED 7 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0877 Aed-Chr9 6134413 6137239 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0877 4 72 Peroxidase AT2G38380 40.580 2.12e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0877 K00430 - gmx:112997743 384.415