Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0876 ATGAATTCCATTCGTCTCAGTTTATGCTGTGTGGTGGTAGTGCTTGGAACACTACCCTTGTTCTCATATGCAGAGCTAGATCCTTCGTTTTACGATAGCACATGTTCAAATGTGAGTTCAATCGTACGTGAGGTGCTCTCAAATGTTTCACAATCTGATCCCCGCATACTTGCAAGTTTCATCAGGCTTCACTTTCACGACTGTTTTGTTCAAGGGTGTGACGCATCAATTCTGTTGAACGACACAGACACAATCATGAGTGAGCAAAGTGCAGCGCCAAACAACAACTCCATAAGAGGTTTGGATGTTGTGAACCAGATTAAAACTGCGGTGGAGAATGCTTGTCCCGGCATAGTTTCTTGTGCTGATATTCTTGCCCTTGCAGCTCAAATTTCTTCTGATCTGGCTAGTGGTCCTGTTTGGGAAGTTCCATTGGGAAGAAGGGATAGTTTGACAGCAAATCAAACCCTTGCTAATCAAAATCTTCCAGCTCCTACTTTTACCATTGATCAACTTATCAACTCATTTAGTAATCAAAGCCTCAACATTACTGATCTAGTTGCACTTTCAGCATCAATGATCAAAATGGGCAACATTGGAGTGCTAACGGGATCAGATGGAGAAATCCGATCACAGTGTAATTCTGTGAATGGCAATTCTTTTGGGCTTACTACTACTGCCACCAAAGAATCATCATCACAAGATAGCATGGTTAGCTCCATGTAA 726 0.4215 MNSIRLSLCCVVVVLGTLPLFSYAELDPSFYDSTCSNVSSIVREVLSNVSQSDPRILASFIRLHFHDCFVQGCDASILLNDTDTIMSEQSAAPNNNSIRGLDVVNQIKTAVENACPGIVSCADILALAAQISSDLASGPVWEVPLGRRDSLTANQTLANQNLPAPTFTIDQLINSFSNQSLNITDLVALSASMIKMGNIGVLTGSDGEIRSQCNSVNGNSFGLTTTATKESSSQDSMVSSM 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0876 241 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed9g0876 241 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed9g0876 241 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed9g0876 241 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed9g0876 241 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed9g0876 241 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed9g0876 241 Gene3D Peroxidase, domain 2 163 190 - -
Aed9g0876 241 Gene3D - 197 217 - -
Aed9g0876 241 Pfam Peroxidase 42 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed9g0876 241 SUPERFAMILY Heme-dependent peroxidases 26 217 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed9g0876 241 Gene3D - 29 162 - -
Aed9g0876 241 PANTHER PEROXIDASE 191 225 - -
Aed9g0876 241 PANTHER PEROXIDASE 5 191 - -
Aed9g0876 241 PANTHER PEROXIDASE 72-RELATED 191 225 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed9g0876 241 PANTHER PEROXIDASE 72-RELATED 5 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed9g0876 241 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed9g0876 241 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed9g0876 241 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed9g0876 241 ProSiteProfiles Plant heme peroxidase family profile. 25 241 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0876 Aed-Chr9 6130147 6132154 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0876 6 191 Peroxidase AT3G32980 57.368 1.95e-66 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0876 K00430 - gmx:106794224 355.525