Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0872 ATGTCATTAAATTTCAAACCATCATTTTCATCTCTAAATTTAGCTACTAAAGTTTTCCTGGGTGCTCATACGTTTGGAAGAGCTCAGTGCAGCACATTCATTGATCGATTATACAATTTCAACGATACTGGAAGTTCTGATCCAACTCTAAACACAACTTACTTAGAAGCATTGAGTGAGATATGCCCCCAAGATGCAACTGTGGACAACCTCACCAATTTGGACCTTACCACACCCAATCAATTTGATAACAAATTCTACTCTAATCTTCAAGACCACAATGGCTTACTTCAGAGCGACCAAGAACTGTTCTCCACTTCTGATGCTGATACCATTGACCTTGTGAATAGCTTCAGTAGTGACCAAAGTGTTTTCTTTGCCAACTTTATAGTGTCAATGATCAAATTGGGTAATATTGAAGTGCTTACTGGGAATGAAGGAGAAATTCGCAGCCAATGTAATTTTGTGAATGGTGACTCGTCTGGGTTAGTTGGTGTGGACAAGCTAGTTGCTCAATCCAAATAA 525 0.3886 MSLNFKPSFSSLNLATKVFLGAHTFGRAQCSTFIDRLYNFNDTGSSDPTLNTTYLEALSEICPQDATVDNLTNLDLTTPNQFDNKFYSNLQDHNGLLQSDQELFSTSDADTIDLVNSFSSDQSVFFANFIVSMIKLGNIEVLTGNEGEIRSQCNFVNGDSSGLVGVDKLVAQSK 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0872 174 Gene3D Peroxidase, domain 2 11 136 - -
Aed9g0872 174 Pfam Peroxidase 18 120 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed9g0872 174 PANTHER PEROXIDASE 19 164 - -
Aed9g0872 174 PANTHER PEROXIDASE 72-RELATED 19 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed9g0872 174 PRINTS Plant peroxidase signature 14 26 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed9g0872 174 PRINTS Plant peroxidase signature 73 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed9g0872 174 PRINTS Plant peroxidase signature 89 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed9g0872 174 PRINTS Plant peroxidase signature 131 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed9g0872 174 PRINTS Haem peroxidase superfamily signature 15 30 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed9g0872 174 PRINTS Haem peroxidase superfamily signature 75 90 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed9g0872 174 SUPERFAMILY Heme-dependent peroxidases 18 157 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed9g0872 174 ProSiteProfiles Plant heme peroxidase family profile. 1 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed9g0872 174 Gene3D - 137 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0872 Aed-Chr9 6100045 6100609 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0872 21 161 Peroxidase AT5G06730 59.574 7.57e-58 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0872 K00430 - vra:106774868 235.343