Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0870 ATGGAGGATTCCGAGGGAGTCCTCAGCTTCGATTTCGAGGGCGGCCTCGACGCGGCTCCCTCCGCCGCCGCCGCCGCCTCCGGCCCCCTCGTCCAGCACGACTCCTCCGCGGCCGCCTCCGCCGTCTCCAACGGAGGCCCCGCCGCCCCCGCCCCCTCCATGGTGGACCCCTCGGGCGGCAACAATAACAACGTCCCCGGGAGGCGGAGCTTCCGGCAGACGGTGTGCCGGCACTGGCTGCGCAGCCTGTGCATGAAGGGAGACGCCTGCGGGTTCCTGCACCAGTACGACAAGGCGCGGATGCCGGTCTGCCGCTTCTTCAGGCTCTATGGAGAGTGCCGAGAACAGGATTGCGTCTATAAACACACCAATGAAGACATCAAGGAGTGTAACATGTACAAGTTGGGGTTTTGTCCTAATGGGCCTGATTGCCGATATAGGCATGCAAAATCTCCCGGCCCTCCACCTCCTGTTGAAGAGGTCCTTCAAAAGATCCAGCATTTATATTCCTACAATTATAATTCATCCAACAAATTTTTCCAACAAAGGGGTGGTAGTTATAATCAACAAGCTGACAAATCCCAGCTTCCTCAAGGAACTAATTCTGCAAACCAAGCAGTGACCGGAAAACCATTACCAGCAGAGTCGGGAAATGTCCAGCCACAGCAACTAGTTCAACAGTCTCAGCAGCAGGTCAACCAGAGCCAAATGCAAAATCCTGCTAATGGCCAGCCTAATCAAGCCAATAGAACTGCAACCCCTTTACCTCAAGGAGTATCTAGGTATTTTATTGTTAAAAGTTGCAATCGTGAAAATTTGGAGTTATCTGTACAACAAGGAGTTTGGGCAACTCAAAGGAGCAATGAATCCAAACTAAATGAAGCATTTGACTCTGTGGAAAATGTGATATTAATTTTCTCTGTCAACCGTACTAGACATTTCCAGGGTTGTGCAAAGATGACATCCAGAATTGGTGGTTCTGTTGCTGGGGGGAACTGGAAATATGCTCATGGTACTGCACATTATGGGCGGAATTTCTCTGTTAAATGGTTGAAGTTATGTGAGCTGTCATTCCACAAAACTCGACATTTAAGGAATCCATACAATGAGAACTTACCTGTGAAGGCTATCTCGATTGCAGCAGAGTCTAAACGGGAAGAAGAGAAAGCCAAGGGAGTGAATCCAGATAATGGAGGAGAAAATCCAGACATTGTCCCATTTGAAGACAATGAAGAAGAGGAAGAGGAAGAAAGTGATGAGGAGGAGGAGAGCTTTGGTCATGGTGTAGGGCCAGGTGGCCAAGGCAGAGGCAGGGGAAGAGGTATGATGTGGCCGCCTCATATGCCTCTTGGACGTGGAGCCCGACCCATGCCTGGAATGCAGGGCTTTAACCCTGTAATGATGGGTGATGGGTTATCCTATGGACCTGTTGGACCTGATGGTTTTGGTATGCCAGATCTTTTTGGTGTGGGACCCCGTGGTTTTGCTCCATATGGTCCTAGGTTCTCTGGTGATTTTGGAGGTCCCCCAGCGGCCATGATGTTTCGTGGACGACCCTCTCAACCCGGGATGTTTCCTGGTGGTGGATTTGGGATGATGATGAATCCTGGACGTGGTCCCTTCATGGGGGGGATGGGGGTTGCAGGTCCAAATCCACCAAGAGGTGGTAGGCCAGTTAATATGCCTCCAATGTTTCCACCACCTCCACCCCTACCTCAGAATGCAAACCGTGTTACCAAGAGAGATCAAAGAAATCCTGATAGGAATGACAGGTTTGGTTCAGGATCAGAGCAGGGTAAGAGTCAAGATATGCTCAGTCAAAGTGGTGGACCTGATGATGATGCACAGTATCAGCAAGGATACAACAAAGGGAACCAGGATGATCATCCTGCTGTGAACAACTTTCGGAATGATGATAGTGAAAGTGAGGACGAGGCACCTAGGCGATCCAGACACGGAGAGGGGAAAAAGAAAAGGTGA 1980 0.5056 MEDSEGVLSFDFEGGLDAAPSAAAAASGPLVQHDSSAAASAVSNGGPAAPAPSMVDPSGGNNNNVPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKSPGPPPPVEEVLQKIQHLYSYNYNSSNKFFQQRGGSYNQQADKSQLPQGTNSANQAVTGKPLPAESGNVQPQQLVQQSQQQVNQSQMQNPANGQPNQANRTATPLPQGVSRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSVENVILIFSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKAISIAAESKREEEKAKGVNPDNGGENPDIVPFEDNEEEEEEESDEEEESFGHGVGPGGQGRGRGRGMMWPPHMPLGRGARPMPGMQGFNPVMMGDGLSYGPVGPDGFGMPDLFGVGPRGFAPYGPRFSGDFGGPPAAMMFRGRPSQPGMFPGGGFGMMMNPGRGPFMGGMGVAGPNPPRGGRPVNMPPMFPPPPPLPQNANRVTKRDQRNPDRNDRFGSGSEQGKSQDMLSQSGGPDDDAQYQQGYNKGNQDDHPAVNNFRNDDSESEDEAPRRSRHGEGKKKR 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0870 659 MobiDBLite consensus disorder prediction 405 423 - -
Aed9g0870 659 MobiDBLite consensus disorder prediction 36 67 - -
Aed9g0870 659 Gene3D - 61 128 - -
Aed9g0870 659 ProSiteProfiles Zinc finger C3H1-type profile. 70 97 IPR000571 GO:0046872
Aed9g0870 659 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45 376 658 - -
Aed9g0870 659 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45 1 375 - -
Aed9g0870 659 MobiDBLite consensus disorder prediction 580 594 - -
Aed9g0870 659 Gene3D ph1033 like domains 240 386 - -
Aed9g0870 659 MobiDBLite consensus disorder prediction 182 255 - -
Aed9g0870 659 Pfam YT521-B-like domain 260 322 IPR007275 GO:0003723
Aed9g0870 659 Pfam YT521-B-like domain 339 376 IPR007275 GO:0003723
Aed9g0870 659 MobiDBLite consensus disorder prediction 632 651 - -
Aed9g0870 659 SUPERFAMILY CCCH zinc finger 70 101 IPR036855 GO:0046872
Aed9g0870 659 SMART c3hfinal6 126 150 IPR000571 GO:0046872
Aed9g0870 659 SMART c3hfinal6 98 124 IPR000571 GO:0046872
Aed9g0870 659 SMART c3hfinal6 70 96 IPR000571 GO:0046872
Aed9g0870 659 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 376 658 IPR045168 -
Aed9g0870 659 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 1 375 IPR045168 -
Aed9g0870 659 MobiDBLite consensus disorder prediction 383 446 - -
Aed9g0870 659 ProSiteProfiles Zinc finger C3H1-type profile. 124 151 IPR000571 GO:0046872
Aed9g0870 659 MobiDBLite consensus disorder prediction 544 659 - -
Aed9g0870 659 MobiDBLite consensus disorder prediction 555 574 - -
Aed9g0870 659 MobiDBLite consensus disorder prediction 595 631 - -
Aed9g0870 659 ProSiteProfiles YTH domain profile. 260 395 IPR007275 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0870 Aed-Chr9 6089070 6097349 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aed9g0870 YTH 5.4e-35 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0870 K14404 - gmx:100802826 1109.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0870 9 6089070 6097349 Aed9g0870 9 6089070 6097349 ECH