Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0865 ATGAAGGAAGGTGGTGGTAGAAAGGCAAAGCAGGGTGCAGCATCACCTTGTGCCGCATGCAAGCTTCTGAGGAGAAGGTGTGCTCAGGATTGTGTTTTTGCTCCATATTTCCCAGCAGATCAACCCCAAAAGTTTGCAAATGTGCACAAGGTCTTTGGTGCTAGCAATGTCAACAAGATGCTTCAGGATCTACCAATGCATCAACGAGGGGATGCAGTAAGTAGCATGGTGTATGAGGCCAATGCAAGAGTCCGAGACCCTGTTTATGGGTGTGTTGGGGCCATCTCTTCGCTTCAGCAACAGATTGATGTGTTACAGGCCCAATTGGCCCTAGCCCAGGCTGAGGTGGCCCACCTTAGGGTGAGACAAAACCGAAGCTTTTCCAATCATGGGCTTAGGCCCATTAGCCCAACTAGTAGTGGGTTTCCATTATCCAAGACCTTGGACTCCCATGCCAAGCCGATTTTTGACATAGACTTGGTGGACCAGGCCAGCTATGGTGCTTCAATGTGGTCATGA 519 0.499 MKEGGGRKAKQGAASPCAACKLLRRRCAQDCVFAPYFPADQPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVAHLRVRQNRSFSNHGLRPISPTSSGFPLSKTLDSHAKPIFDIDLVDQASYGASMWS 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0865 172 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 133 - -
Aed9g0865 172 Pfam Lateral organ boundaries (LOB) domain 16 113 IPR004883 -
Aed9g0865 172 Coils Coil 95 122 - -
Aed9g0865 172 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 9 133 - -
Aed9g0865 172 ProSiteProfiles LOB domain profile. 15 116 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0865 Aed-Chr9 6055205 6058242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0865 10 172 AS2 family AT1G31320 80.606 2.90e-78 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aed9g0865 LOB 7.6e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0865 - - gmx:100794219 305.064