Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0847 ATGACTGACGATACCATGTGTTCTCTAAACGACAAGGACGACTTGGCACTGAGTCCTAATCTTGATATCACGATAGATGATGGTTCCCCAAACAGTGAGCAATTACTGGAGGTTGAGGATGAGGGCAATGAACTTGAGAATGAATGTGGGCAATTGTTTGAGATTGATGGAAGTGAACCTGAAAATGGGAGGGATGAAACGACAGTAGTTGATAGTCATAGTGGAGAATCTCTAGGGAAATACTGCCCTCCACCAGTTGTAGGAATGGAGTTTGATACCTATGACGATGCCTACAACTATTACAATACTTATGCCAAGGAAATTGGATTTGCTATTCGGGTTAAGTCTTCGTGGACCAAACGTAACAGCAAAGAAAAGCGTGGTGCTGTGCTGTGCTGCAACTGTGAGGGTTTCAAAACAACCAAAGAAGCAAATAGTCATAGGAAAGAAACAAGAACAGGCTGTCTAGCAATGATTAGATTGAGATTAGTGGACTCTAACAGGTGGAGAGTTGATGAAGTCAAGCATGAGCACAACCATTCATTTGATCCTGAAAGAGCACAAAACTCTAAATCACATAAGAGGATGGACAGTAGGGCCAAAAGAAAAGTTGAGCCAACTTTAGATGTTGAACTAAAAAAGCATAGAACTGAAGTTCTTGATGATTTTGAGTCGCATGATTTGAGCTCATTACTGAAGACAAGATGCTACTATGAGTTGCAACTCTCTAAACTGTACACTAATGCAGTATTCAGGAAGTTCCAAGATGAGGTGCTGATGATGTCCTCTTGTTTCAGCATCACACAGACTCAAACAAGTGGGTCTATAGTGACGTACATGTGTTTTGACCATTTGTACAAACGTGCCATGCAAGTTGTTGAAGAAGGGATGATATCCCAAGATCATTATATGGTTTCTTGGCAAACATTTAAAGAGTCTTTGAATAAGATTCGCCTTGTAGCAGACAAGATTGAATAA 978 0.4049 MTDDTMCSLNDKDDLALSPNLDITIDDGSPNSEQLLEVEDEGNELENECGQLFEIDGSEPENGRDETTVVDSHSGESLGKYCPPPVVGMEFDTYDDAYNYYNTYAKEIGFAIRVKSSWTKRNSKEKRGAVLCCNCEGFKTTKEANSHRKETRTGCLAMIRLRLVDSNRWRVDEVKHEHNHSFDPERAQNSKSHKRMDSRAKRKVEPTLDVELKKHRTEVLDDFESHDLSSLLKTRCYYELQLSKLYTNAVFRKFQDEVLMMSSCFSITQTQTSGSIVTYMCFDHLYKRAMQVVEEGMISQDHYMVSWQTFKESLNKIRLVADKIE 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0847 325 PANTHER PROTEIN FAR1-RELATED SEQUENCE 8 281 322 - -
Aed9g0847 325 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 213 280 IPR031052 GO:0006355
Aed9g0847 325 MobiDBLite consensus disorder prediction 175 203 - -
Aed9g0847 325 PANTHER PROTEIN FAR1-RELATED SEQUENCE 8 213 280 - -
Aed9g0847 325 PANTHER PROTEIN FAR1-RELATED SEQUENCE 8 32 212 - -
Aed9g0847 325 Pfam FAR1 DNA-binding domain 99 183 IPR004330 -
Aed9g0847 325 MobiDBLite consensus disorder prediction 56 76 - -
Aed9g0847 325 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 32 212 IPR031052 GO:0006355
Aed9g0847 325 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 281 322 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0847 Aed-Chr9 5881368 5885499 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aed9g0847 FAR1 2.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0847 K17604 - gmx:100796448 393.275