Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0846 ATGTTCACCCAATCCTCTTCTATTTTCTATTATGCCTTCAATTTCAAATCAGGAAGTGCCATCACTTTGGTGAGGAAAGGGGATAGGAGGCCTATGTTAGATGGAATGGAAGAGACCACTCTCTGCTGCGAACAATTGCCGGATGGGGAATGCATTGAGGTTCAGAAAGACGAAGAAGACGGTGCACTGGTTGAATTGGACTGTCAAAATGCTTTTCCTGAAGGAAGAAAGGAGTTTGTTGCACCTGCTGTTGGAATGGAGTTTGAGTCCTATGATGATGCTTACAATTACTATATTTGCTATGCCAAGGAGGTGGGGTTTCGCGTCCGGGTGAAGAATTCGTGGTTTAAGCGGAATAGTCGGGAGAAGTATGGTGCAGTGCTTTGCTGTAGCAGCCAGGGTTTCAAGAGAGTAAAGGACGTTAATCATTTGAGGAAAGAGACGAGAACTGGCTGTCCTGCAATGATAAGGATGAGGTTAGTGGAGTCTCAGAGATGGAGGGTGCTTGAGGTTGCACTCGAGCATAACCACATGTTAGGTGCTAAGATACCCAGGTCGGTTAAGAAGATGGGAAATGGAACGAAGCAGAAGCCGTTGCCTGGCTCTGATGCTGAGGGGCAGACGATTAAGTTATATCGTGCACTTGTGATAGATGCGGGAGGTAATGGAAATTCAAACTCCATTGCAAGAGAGGACAGAACTTTCTCGGAATTTTCTAATAAAATCTACACAAGAGAGATGTTCATGAAATTTCAGCTAGAAGTAGAAGAAGTGTATTCTTGTTTTGGTACAACACAATTACATGTGGATGGCCCCATCATAATTTTCTTGGTCAAGGAGCGTGTTTTGATTGAGGGAAACCGACGAGAGATTAGGGATTTTGAAGTTTTGTACAGTAGGACGGCAGGGGAAGTTCGTTGCATCTGTAGTTGCTTTAATTTTTATGGATATCTATGCCGGCATGCTCTGTGTGTGCTCAATTTTAATGGAGTTGAAGAGATACCTCACAAATACATTCTTTCACGATGGAAGAAAGATTACAAGCGCCTTATTGTTCCTGCTCACAGCTCTGGTGTTGCTAATGATACTGATCGCATTCAATGGTCTAATCAGTTATTCAGAAGTGCCTTACAAGTTGTGGAGGAGGGGATACTCTCTCTAGACCATTACAATGTAGCCTTACAATCTTTAGAAGAATCACTGAGAAAGGTTCATGATGTAGAACAGAGACAGGAGTAA 1239 0.4318 MFTQSSSIFYYAFNFKSGSAITLVRKGDRRPMLDGMEETTLCCEQLPDGECIEVQKDEEDGALVELDCQNAFPEGRKEFVAPAVGMEFESYDDAYNYYICYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRVKDVNHLRKETRTGCPAMIRMRLVESQRWRVLEVALEHNHMLGAKIPRSVKKMGNGTKQKPLPGSDAEGQTIKLYRALVIDAGGNGNSNSIAREDRTFSEFSNKIYTREMFMKFQLEVEEVYSCFGTTQLHVDGPIIIFLVKERVLIEGNRREIRDFEVLYSRTAGEVRCICSCFNFYGYLCRHALCVLNFNGVEEIPHKYILSRWKKDYKRLIVPAHSSGVANDTDRIQWSNQLFRSALQVVEEGILSLDHYNVALQSLEESLRKVHDVEQRQE 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0846 412 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 55 213 IPR031052 GO:0006355
Aed9g0846 412 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 233 409 IPR031052 GO:0006355
Aed9g0846 412 Pfam FAR1 DNA-binding domain 96 179 IPR004330 -
Aed9g0846 412 PANTHER PROTEIN FAR1-RELATED SEQUENCE 6 55 213 - -
Aed9g0846 412 ProSiteProfiles Zinc finger SWIM-type profile. 294 330 IPR007527 GO:0008270
Aed9g0846 412 PANTHER PROTEIN FAR1-RELATED SEQUENCE 6 233 409 - -
Aed9g0846 412 Pfam SWIM zinc finger 282 326 IPR007527 GO:0008270
Aed9g0846 412 SMART 26again6 305 332 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0846 Aed-Chr9 5875817 5878183 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aed9g0846 FAR1 1.6e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0846 K17604 - gmx:100796448 402.134