Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0843 ATGGATCAGACAGAAGACCATTCCCATGAAGTAGTGTGCGTGACCGGCGCGAACGGTTTCATAGGTTCGTGGCTGGTGCGAACGCTCTTGGAGAAGGAGAACCCATGCTACGTCATCCACGCCGCCATCTTCCCCGGCTCCGACGCCTCCCACCTCTTCACCCTCCACCCCTCCGCCGCCGCGCGCCTCACCGTCTTCCCCGCCGACCTCCTCGACGCCGACGCACTCTCCCGTGCCATATCCGACTGCTCCGGCGTGTTCCACGTGGCCTCCCCCTGCACGCTCGAGGACCCCGCGGACCCGCAGAGGGAGCTCCTCCAGCCCGCGGTGCAGGGCACGCTGAATGTCTTAACCGCAGCAAAGCGCGTGGGAGTTCGGCGCGTGGTGCTTACCTCCTCGATCTCCGCGATGGTGCCGAACCCGCGGTGGCCGGCGTGCCGGCCCGTGGACGAGGCGTCGTGGACGGACGTGGAGTACTGCAGGGGGAGGAGGAAGTGGTACCCGGTGGCCAAGACGGAGGCGGAGAGGGCGGCGTGGGCTTTCGACGGCGTGGAAGTGGTGGCGGTTCTGCCGGCGACGTGTCTGGGGCCGCTGCTGCAGCCGGAGCTGAACGCGAGCTCCGGCGTGCTGCAGAGGCTGATGATGGGGTCGAAGGAGAGTCAAGAGTATCATTGGTTGGGTGCGGTGCATGTGAAGGACGTTGCTAAAGCTCATGTTTTGCTCTATGAAACTCCCACTGCTGCTGGTAGATACCTCTGCACCAATGGTATCTATCACTTTTCTACCTTTGCTGCTTTGGTCTCTCAATTGTTCCCTGAAGAAACACAACCTGGCCTTACACCATCTAAAGATGCAGCAAAGAGACTAATAGACTTGGGCCTTGTCTTCACACCAATTCAAGATGCTGTGAGAGAAGCAGTGGAGAGCCTTGTAGCTAAAGGCTTCCTGCAGTGCCCACCTTCACAGAGTTAG 972 0.608 MDQTEDHSHEVVCVTGANGFIGSWLVRTLLEKENPCYVIHAAIFPGSDASHLFTLHPSAAARLTVFPADLLDADALSRAISDCSGVFHVASPCTLEDPADPQRELLQPAVQGTLNVLTAAKRVGVRRVVLTSSISAMVPNPRWPACRPVDEASWTDVEYCRGRRKWYPVAKTEAERAAWAFDGVEVVAVLPATCLGPLLQPELNASSGVLQRLMMGSKESQEYHWLGAVHVKDVAKAHVLLYETPTAAGRYLCTNGIYHFSTFAALVSQLFPEETQPGLTPSKDAAKRLIDLGLVFTPIQDAVREAVESLVAKGFLQCPPSQS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0843 323 Gene3D - 2 323 - -
Aed9g0843 323 CDD FR_SDR_e 12 294 - -
Aed9g0843 323 Pfam NAD dependent epimerase/dehydratase family 12 247 IPR001509 -
Aed9g0843 323 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 309 IPR036291 -
Aed9g0843 323 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 10 306 - -
Aed9g0843 323 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0843 Aed-Chr9 5864767 5866425 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0843 8 316 Monolignol Biosynthesis Gene Families AT2G02400 64.062 4.96e-153 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0843 - - gmx:100795399 548.51