Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0841 ATGGGTGAAGGAATTCTAGTATTCCTACTACTCTTTTTCACTCATTTGTTGATTGCACTAGCAAAGACATCAACTCAGGATTACACTGCTTTGCTGGCTCTAAAGAATGAATGGCAGAACACACCACCCAATTGGGTGGGTTCAGATCCTTGTGGTGCTGGTTGGGATGGCATTGAGTGTACCAATTCACGCGTTACCTCCATATCATTAGCAAGCATAGATTTGTCTGGCCAGCTTACTTCAGATATTGGATTACTATCTGAACTTCTGATTTTGGATCTGTCTTACAATAAGAATTTAACTGGACCACTTCCAAATGACATTGGAAACTTGAGAAAGCTGAGAAACTTACTTCTTATTAATTGTGGTTTCACTGGTCCTATCCCAGATACAATTGGAAATCTAGAACAGCTTGTCTTCCTATCTTTAAATTCAAATGGATTCATTGGAACAATTCCAGCAGCCATTGGTAATCTCTCAAATGTTTATTGGCTAGACTTAGCCGAAAATCAGCTTGAAGGGCCCATCCCCATATCTAATGGAACTACTCCTGGTCTTGATATGATGCACCATACAAAGCACTTCCATTTTGGGAAGAATAAGCTTTCAGGAAACATACCTTCTCAACTTTTCAGCTCGGAAATGTCTCTCATACATGTGCGTTTTGATGATAACTTTTTTAGTGGACCTTTGCCTCTGAACATCAACAATCTTACAAGAGTTAGGGAATTGTTCCTGTCCAACAATCGCCTGTCTGGTTCCACCCCAAACCTTACTGGAATGAATTTCCTCAGTTACCTAGATATGAGCAACAATAGTTTTGATCCATCAGACTTTCCACCGTGGTTGCCAACTCTTCCAGCTCTGACAACAATGGTGCTGAAAAACAACCAGCTAAATGGCACTTTAGATATTGGCACCTCCATCAGCAACAACCTGGATCTCCTTGATTTGCAGATTAATTTAATTGAAGTTTTTGATCCACAAATTGATGTATCTAAAGTGGAGATAATACTTGTGAGTAATCCGGTTTGCCAAGAAAAGACAGGAGTTCCACCAACTTATTGCTCCATTATTACAAAATCCAATGACTCATATTTAACGCCACCAGATAACTGTGTGCCTGTTCCATGCAGCTTAGATCTGACATTAAGCCCCAAGTGCAAATGTGCATACCCATATACAGGGACTTTATATCTCAGAGCTCCTTCCTTCTCAGACTTGGAAAACAAGACAGTCTTTGAAACTCTGGAGTCAACTCTGTGGGAGTCTTTTCAACTTCATAAGAAACCTGTGGATTCAGTTTCTTTAAGCAATCCAAGGAAGAACATATATCAGTACCTTGAGTTGACATTAAAAATATTTCCACTAGGCCAAGACAGTTTCAATAGAACAGGAATTTCTGGTATAGCCTTTATTCTTAGCAACCAAACATACAAGCCTCCTCCAATGTTTGGACCATATTATTTTATTGCTGATGAGTATGAAAACTATGTGGATAACTCAGTATTAGAAGGTCCTGTGACATCCAGTGGTAAATCTTCAAATATTGGCATCATAGCTGGAGCTGCTGGTGGCGGTGCTGCCCTGTTGGTGTTAGTAGTCCTTGCATGTGTGTGTGCTATCAGCCGAAAGAAAAAGTCAAAAAAATCAACTTGGAATACCAATCCTTTTGAACAATGGGATCCGCATGAGAGCAATAGTAGCATCCCACAGTTGAAAGGAGCAAGGCGCTTCACTTTTGAAGAGATACAGAACTGCACCAGAAACTTTTCACAAGTCAATAATATAGGATCTGGCGGGAAGTCTGGAATAAGATTGGACTGGATTAGAAGGCTAAAAATAGCACTTGGTGCTGCGAGGGGACTGGATTATCTGCATGAACTTGCCAATCCTCCAATCATACACAGGGACATCAAATCCACGAACATCTTACTGGATGAGCGCTTGAATGCTAAAGTATCTGATTTTGGTCTCTCCAAGCCTTTGGGTGATGGTGCAAAAGGCTTCTATGGTCTTGAGGAATTTCTTGATCCAACTATTGATCTGGGGACAGCACTGAGCGGTTTTGAGAAGTTTGTGGACCTTGCAATGCAGTGTGTTGATGAGTCAAGTTCTGACAGGCCTACAATGAATTCTGTGGTGAAAGAAATTGAAAACATGTTGCAGTTGGCTGGTTCAAGCCCCATCTTATCAGCATCAGCATCAGCATCCACTTCATCTATTGTAGTCCTAAAGTCTCTAAGGGATTCTTGGCAAGGCCAGACTCCCAACTTGGAGGGTTTAGATCCTTGCAATTGGTATGGCATTAACTGCAAAAACTCACGTGTTATTTCCATATCATTACCAAATGTTGGTTTTACCGGCCAGCTTTCAGGAGATATTGGATCACTCTCTGAATTGGAGATTCTGGATCTCTCATACAATAGGGGCCTCACAGGATCACTTCCACCAGAAATTGGAAACTTGAAGAAGTTATCAAAATTAACTCTTGTTGGTTGTGGCTTTACTGGTCGTATTCCAGATGAAATAGGATCTCTACAACAGCTTGTTTTCTTATCTTTAAACTCCAACAATTTTTCAGGACCAATTCCACCTTCTATTGGCAATCTGTCAAACCTTACTTGGCTAGATTTAGCTGACAATCAGCTTGATGGATCCATCCCAGTATCTAGTGGCACTGTCCCTGGTCTTGATATGTTGCACAAAACACTTCACTTTCATCTTGGGAAGAATAGGTTTTCGGGAGAAATTCCTCAAAAACTTTTTAGCTCGAATATGACTCTGATACATGTGGTTTTTGAGAGCAATCAACTAGTTGGCAGCATTCCAGAAACACTTGGGCTAGTGAAGAGTTTGACATTGGTGCGCTTTGACAATAATTCATTGGATGGACATGTGCCTCAGAGCCTCAACAACCTTACCTATGTCACAGACCTGTTGTTGTCCAACAATAAGCTTCAAGGTTCCCTGCCAAGCCTTACTGGGATGAACTCCCTAAAATACTTGGACTTGAGCAATAATAGCTTTGATGAGTCAGGTTTTCCAGTATGGCTTTCAAATCTGAAGAATTTAATAACATTACAAATGGAGAATGTGAAACTTAATGGACACATTCCGGTTCCTTTATTTAGCCTTGCCAATTTAACAAATGTTGTGCTAAAAACCAACTCCCTTGGTGGAACCTTGGATATTGGCACCAACTACAGCAAAAAACTGAAACTTATTGATTTGAAGTCAAATTCAATTGAGGACTTCGAGCAACGAAATGATCACCTGGAGGGTATCACAATAATGCTTGCGTCCAACCCGATTTGTACCGAAACAGGAGCTAAGCAGGATTACTGCACCATGCACAATGTCTCAGATACAAATCCACAAAATAACTGTCAACATGTTATTTGCAGTCCAGATCAGATTCGCAGTCCCAAGTGCATATGTGGATATCCATATACAGGAACTTTAACTTTCAGAGCACCTTCAGTTTTTGAATGGACAAATAAAACATACATGGAGGAGGATCTTTTGCATAAATTTCAATCTAAATATCTACCTGTGGATTCAGTTTATTTAGCTGTGGATCCATTTCGTAGATTTGAGTTTATCATACAAATTTTCCCACCAGGCCAAGATCATTTCAACCAACAAGCCAAATCCAATATAAGCTATTATCTTGGCAACCTAAGTGCTTCTAATGCATATTATTTTATTACAGGAAACCAAGCTGAAGGACTTAAAGAGTCAAGTAGTTCATCAAACACTGTCATGATTATTGGAGCAGCAGTTGGCGGTTCTTCTGTTCTGCTTGTGTTATTAGTCCTTGCAGGTGTTTATGCTTTCCATCAGAAGAGAAGGGCAGAAAGAGCAATCTCTCGAAGCAATCCTTTTGGAAACTGGGATCCAAATAAAAGCAATTGCGGCACCCCTCAGTTAAAAGCAGCAAGGCAGTTTTCTTTTAAAGAAATTAAGAAATACACAAACAACTTCTCACAAGACAATGGTGTTGGATCAGGGGGTTATGGAAAGGTCTTGAATGTTTCTTATAAGACAAAAGACTTGTATGGTCTTCGCAAAATTATTGACCCGACCATCTGTTCAGGATCAAGACTTGAGGGTTTTGAGAAGTTTGTGGACCTTGCAATGGAGTGTATTGAAGATTCAGGAGTTGACAGGCCTGCAATGAGTGATGTGGTTAAAGAAATTGAAGAAATGTTGAGGTCTGTTGGTTTGCACCTAGCATCTGAATCATTAGCATCCACTGCATCTAGTTATAGATATCAGGAGGTAAGTATAGTGAGTCCTCATCAGAACCATCCTTACAGCAATGAGTCCTTTGGTTCAAGTGCAGAACATTTCTATTCAAAAAATGAGCCCAGGTAA 4380 0.4023 MGEGILVFLLLFFTHLLIALAKTSTQDYTALLALKNEWQNTPPNWVGSDPCGAGWDGIECTNSRVTSISLASIDLSGQLTSDIGLLSELLILDLSYNKNLTGPLPNDIGNLRKLRNLLLINCGFTGPIPDTIGNLEQLVFLSLNSNGFIGTIPAAIGNLSNVYWLDLAENQLEGPIPISNGTTPGLDMMHHTKHFHFGKNKLSGNIPSQLFSSEMSLIHVRFDDNFFSGPLPLNINNLTRVRELFLSNNRLSGSTPNLTGMNFLSYLDMSNNSFDPSDFPPWLPTLPALTTMVLKNNQLNGTLDIGTSISNNLDLLDLQINLIEVFDPQIDVSKVEIILVSNPVCQEKTGVPPTYCSIITKSNDSYLTPPDNCVPVPCSLDLTLSPKCKCAYPYTGTLYLRAPSFSDLENKTVFETLESTLWESFQLHKKPVDSVSLSNPRKNIYQYLELTLKIFPLGQDSFNRTGISGIAFILSNQTYKPPPMFGPYYFIADEYENYVDNSVLEGPVTSSGKSSNIGIIAGAAGGGAALLVLVVLACVCAISRKKKSKKSTWNTNPFEQWDPHESNSSIPQLKGARRFTFEEIQNCTRNFSQVNNIGSGGKSGIRLDWIRRLKIALGAARGLDYLHELANPPIIHRDIKSTNILLDERLNAKVSDFGLSKPLGDGAKGFYGLEEFLDPTIDLGTALSGFEKFVDLAMQCVDESSSDRPTMNSVVKEIENMLQLAGSSPILSASASASTSSIVVLKSLRDSWQGQTPNLEGLDPCNWYGINCKNSRVISISLPNVGFTGQLSGDIGSLSELEILDLSYNRGLTGSLPPEIGNLKKLSKLTLVGCGFTGRIPDEIGSLQQLVFLSLNSNNFSGPIPPSIGNLSNLTWLDLADNQLDGSIPVSSGTVPGLDMLHKTLHFHLGKNRFSGEIPQKLFSSNMTLIHVVFESNQLVGSIPETLGLVKSLTLVRFDNNSLDGHVPQSLNNLTYVTDLLLSNNKLQGSLPSLTGMNSLKYLDLSNNSFDESGFPVWLSNLKNLITLQMENVKLNGHIPVPLFSLANLTNVVLKTNSLGGTLDIGTNYSKKLKLIDLKSNSIEDFEQRNDHLEGITIMLASNPICTETGAKQDYCTMHNVSDTNPQNNCQHVICSPDQIRSPKCICGYPYTGTLTFRAPSVFEWTNKTYMEEDLLHKFQSKYLPVDSVYLAVDPFRRFEFIIQIFPPGQDHFNQQAKSNISYYLGNLSASNAYYFITGNQAEGLKESSSSSNTVMIIGAAVGGSSVLLVLLVLAGVYAFHQKRRAERAISRSNPFGNWDPNKSNCGTPQLKAARQFSFKEIKKYTNNFSQDNGVGSGGYGKVLNVSYKTKDLYGLRKIIDPTICSGSRLEGFEKFVDLAMECIEDSGVDRPAMSDVVKEIEEMLRSVGLHLASESLASTASSYRYQEVSIVSPHQNHPYSNESFGSSAEHFYSKNEPR 1459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0841 1459 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 667 740 - -
Aed9g0841 1459 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 601 670 - -
Aed9g0841 1459 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 734 1345 - -
Aed9g0841 1459 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 4 602 - -
Aed9g0841 1459 Gene3D Ribonuclease Inhibitor 24 182 IPR032675 -
Aed9g0841 1459 Gene3D Ribonuclease Inhibitor 734 895 IPR032675 -
Aed9g0841 1459 Gene3D Transferase(Phosphotransferase) domain 1 597 681 - -
Aed9g0841 1459 SUPERFAMILY L domain-like 30 321 - -
Aed9g0841 1459 SMART LRR_typ_2 997 1022 IPR003591 -
Aed9g0841 1459 SMART LRR_typ_2 135 159 IPR003591 -
Aed9g0841 1459 SMART LRR_typ_2 798 823 IPR003591 -
Aed9g0841 1459 SMART LRR_typ_2 238 261 IPR003591 -
Aed9g0841 1459 SMART LRR_typ_2 871 895 IPR003591 -
Aed9g0841 1459 Pfam Protein kinase domain 614 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0841 1459 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 1349 1438 - -
Aed9g0841 1459 Gene3D Phosphorylase Kinase; domain 1 1300 1371 - -
Aed9g0841 1459 ProSiteProfiles Protein kinase domain profile. 518 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0841 1459 SMART tyrkin_6 542 718 IPR020635 GO:0004713|GO:0006468
Aed9g0841 1459 Pfam Leucine rich repeat N-terminal domain 760 772 IPR013210 -
Aed9g0841 1459 Pfam Leucine rich repeat N-terminal domain 26 60 IPR013210 -
Aed9g0841 1459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Aed9g0841 1459 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1349 1438 - -
Aed9g0841 1459 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 601 670 - -
Aed9g0841 1459 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 734 1345 - -
Aed9g0841 1459 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 4 602 - -
Aed9g0841 1459 SUPERFAMILY Protein kinase-like (PK-like) 605 717 IPR011009 -
Aed9g0841 1459 MobiDBLite consensus disorder prediction 1435 1451 - -
Aed9g0841 1459 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 667 740 - -
Aed9g0841 1459 SUPERFAMILY L domain-like 771 1113 - -
Aed9g0841 1459 MobiDBLite consensus disorder prediction 1435 1459 - -
Aed9g0841 1459 Gene3D Ribonuclease Inhibitor 896 1093 IPR032675 -
Aed9g0841 1459 Gene3D Ribonuclease Inhibitor 183 334 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0841 Aed-Chr9 5847249 5860672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0841 667 739 Receptor kinase-like Gene Family AT5G49760 48.649 1.72e-13 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Aed9g0841 Pkinase 2.3e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0841 - - gmx:100782366 979.933