Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0832 ATGGCCGGTACGGAGTTAGAAATTTCTCCGGCGGACGCTCGCAAGGCTCCCGGCAAGGAGCAGCAAGCCGCCGGGGTCGGAATCCTCCTGCAGATCATGATGCTGGTCTTGTCCTTTGTCCTCGGCCACGTCCTCCGTCGCAAGAAGGTTTACATCATCCCCGAAGCCAGTGCTTCTCTCCTAATAGGGTTAATTGTTGGTATACTAGCAAACATTTCAGACACTGAAACTAATATCAGGCTACCGTTTGTTGAGTGCCTGATGTTTGGTGCTCTTATATCAGCTACTGATCCTGTTACAGTTCTGTCCATATTTCAGGAGCTGGGCACAGATGTCAATCTATATGCCTTGGTTTTTGGAGAATCTGTTTTGAATGATGCAATGGCAATTTCTTTGTACAGGACAATGTCATCAGTTAGAGCTGATCCATCTGGACAAAATTTATTCATGGTGGTTGTTCGATTTTTGGAGACTTTTGTAGGGTCAATGTCTGCAGGATTGGATATTGACAAGTATATGCTTGCTGAAGGCCTTGGTCTGTCTGGTATTGTATCAATCCTGTTCACAGGAATAGTCATGAAACATTATACGTATTCCAATTTATCACACAGTTCTCAACGGTTTGCCTCTGCTTTTTTCGAGTTGATATCATCTTTAGCTGAAACATTTGTATTTATATACATGGGCTTTGATATTGCTATGGAGCAACATAGCTGGTCACATGTTGGATTTATATTCTTCTCCATTATGTTCATTGGAATTGCAAGGGCAGCAAATGTCTTCTCATGTGCTTATTTGGTCAATCTGGTCAGACCCACTCATCGAAAGATACCTCCAAAATATCAGAAGGCACTTTGGTATAGTGGACTTCGAGGTGCAATGGCTTTCGCACTTGCTCTGCAATCAATTCATGATCTTCCAGAAGGACATGGACAGACCATCTTTACTGCAACTACTGCAATAGTTGTTTTGACGGTATTGCTGATTGGTGGTTCAACAGGTAGCATGCTGGAAGCTCTAGATGTTGTAGGTGGAGATAGTGATAGCCCTTTGGCTTCAGTTGGCACCATCACAAATTTTGATGGAAACCATGGTTACATTGCTCCTCCTTACAATGAAGAATCATCTTCAGGGAACAAAATCAAGATGAAGCTAAAAGAATTCCACAAGACTGCTGCATCTTTTACGGCAATAGATAAAAACTACCTGACCCCATTCTTTACAAGTCAAAATGGAGATGCAGATGATGAAGACGAGTCTTTTACTTCTACAAGATCAGGATATCATGGCCAGAGCCCCTATTCATCATGA 1311 0.4256 MAGTELEISPADARKAPGKEQQAAGVGILLQIMMLVLSFVLGHVLRRKKVYIIPEASASLLIGLIVGILANISDTETNIRLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMSSVRADPSGQNLFMVVVRFLETFVGSMSAGLDIDKYMLAEGLGLSGIVSILFTGIVMKHYTYSNLSHSSQRFASAFFELISSLAETFVFIYMGFDIAMEQHSWSHVGFIFFSIMFIGIARAANVFSCAYLVNLVRPTHRKIPPKYQKALWYSGLRGAMAFALALQSIHDLPEGHGQTIFTATTAIVVLTVLLIGGSTGSMLEALDVVGGDSDSPLASVGTITNFDGNHGYIAPPYNEESSSGNKIKMKLKEFHKTAASFTAIDKNYLTPFFTSQNGDADDEDESFTSTRSGYHGQSPYSS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0832 436 Pfam Sodium/hydrogen exchanger family 172 338 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Aed9g0832 436 Pfam Sodium/hydrogen exchanger family 45 167 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Aed9g0832 436 PANTHER SODIUM/HYDROGEN EXCHANGER 14 78 IPR018422 GO:0006812|GO:0015299|GO:0016021
Aed9g0832 436 PANTHER SODIUM/HYDROGEN EXCHANGER 80 169 IPR018422 GO:0006812|GO:0015299|GO:0016021
Aed9g0832 436 PANTHER SODIUM/HYDROGEN EXCHANGER 171 420 IPR018422 GO:0006812|GO:0015299|GO:0016021
Aed9g0832 436 Gene3D - 83 135 - -
Aed9g0832 436 MobiDBLite consensus disorder prediction 408 436 - -
Aed9g0832 436 PANTHER SODIUM/HYDROGEN EXCHANGER 6 14 78 - -
Aed9g0832 436 PANTHER SODIUM/HYDROGEN EXCHANGER 6 80 169 - -
Aed9g0832 436 PANTHER SODIUM/HYDROGEN EXCHANGER 6 171 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0832 Aed-Chr9 5807342 5813725 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0832 87 340 Antiporters AT3G05030 31.438 2.41e-26 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0832 K14724 - gmx:100781280 624.78