Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0825 ATGTATCATTCAAAGAATGTTCCTAGTGCAAGTTTAGTTGGAGGTAATTCATTAGTTCATGGTCAGCACATAGATTGTGGGGGCAGTGCAATGGATCCTGGCAGTGGAGGAAACAGTCTTGGCAACAACTCTAATCTCACCTCAAAACAACGTTTACGGTGGACGCATGAATTACATGAGCGCTTTGTTGATGCTGTGGGTCAACTTGGTGGGCCGGATCGTGCCACACCCAAAGGTGTCCTCAGAGTTATGGGTGTACAAGGCTTGACCATTTACCATGTCAAAAGCCATTTACAGAAATACCGACTAGCAAAATATTTACCTGACTCCTCATCTGATGAAGGGAAAAAGGCTGACAAGAAAGAAACAGGGGATATGCTTTCCAATCTCGATGGTTCATCTGGGATGCAGATTACTGAAGCTCTAAAGCTTCAAATGGAGGTGCAAAAGCGACTACATGAACAATTGGAGGTGCAGAGACAATTACAATTACGGATAGAAGCCCAGGGTAAATACCTGAAAAAGATAATTGAAGAACAACAGCGACTCAATGGTGTTCTTTCAGAGGCACCTGGTTCTGACGCTGCCGCTGTGGTTCCAGGGGATGCATGCCAAGAACCTGATAATAAGACTGATCCGTCCACCCCCGACCCTGAAAAGGCTGCCAAAGACCGTGTCCCGGCAAAGAGTCTTTCAATTGAATCTTTTTCGTCACAGCATGAACCATTGACACCAGATTCTGGCTGCCATGTTGGCTCCCCTGCTGACAGCCCTAAAGGGGAGAGATCATCCAAGAAGCAAAGAGTAACCATGGACGGAGCATATTCTAAACCAGACATGGTGCTTCCACATCAAATACTGGAGTCAAGCATGTCATCATACCAGCAACCTAACACTGTTTTTCTTGGCCAAGAGCAATTTGATCCTTCATTGGGTATATCTACTAGAAGTGGTGAGGAATTGGATAAGGTTGGTGGCAGTAATCTGTGA 990 0.4545 MYHSKNVPSASLVGGNSLVHGQHIDCGGSAMDPGSGGNSLGNNSNLTSKQRLRWTHELHERFVDAVGQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDEGKKADKKETGDMLSNLDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLNGVLSEAPGSDAAAVVPGDACQEPDNKTDPSTPDPEKAAKDRVPAKSLSIESFSSQHEPLTPDSGCHVGSPADSPKGERSSKKQRVTMDGAYSKPDMVLPHQILESSMSSYQQPNTVFLGQEQFDPSLGISTRSGEELDKVGGSNL 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0825 329 MobiDBLite consensus disorder prediction 310 329 - -
Aed9g0825 329 MobiDBLite consensus disorder prediction 191 282 - -
Aed9g0825 329 Gene3D - 48 107 - -
Aed9g0825 329 SUPERFAMILY Homeodomain-like 47 103 IPR009057 -
Aed9g0825 329 MobiDBLite consensus disorder prediction 212 227 - -
Aed9g0825 329 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 49 104 IPR006447 GO:0003677
Aed9g0825 329 Coils Coil 139 159 - -
Aed9g0825 329 MobiDBLite consensus disorder prediction 108 132 - -
Aed9g0825 329 Pfam MYB-CC type transfactor, LHEQLE motif 136 182 IPR025756 -
Aed9g0825 329 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 321 IPR044848 GO:0003700
Aed9g0825 329 Pfam Myb-like DNA-binding domain 52 102 IPR001005 -
Aed9g0825 329 MobiDBLite consensus disorder prediction 108 126 - -
Aed9g0825 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 48 106 IPR017930 -
Aed9g0825 329 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7 3 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0825 Aed-Chr9 5752695 5757027 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0825 84 329 G2-like Transcription Factor Family AT2G01060 61.742 7.80e-92 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aed9g0825 Myb_DNA-binding 1.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0825 - - gmx:100786925 596.275