Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0824 ATGTACCCGAGGCTCATACACCCCCATGATGGGATTGTGACGCAGGATGACATGCAGGGTGCTGCTTCGAACCTCTCTCACGCTCACAAGGGTGACCCTTGTCTCGTTTTGACGGCTGATCCCAAGCCTCGTCTTCGTTGGACTCAGGACTTGCACGAACGCTTCGTTGATGCGGTCACGCAGCTCGGTGGAGCTGGCAAAGCTACACCAAAAGCAATCATGCGGACCATGAATGTCAAGGGTTTGACTCTGTTTCATTTGAAGAGTCATCTTCAGCGAAATGAAACCTTTCTTTCTGAATTGCAGAAATACAGGCTTGGTAAGCAATCTGGGAAAGATATGGGTGAAGGATGCAAAGATGGTTCATATCTTCTAGAAAGCCCTGGCACTGATAACTCTTCTCCAAAGTTGCCAACTTCTGATACAAATGAGGGTTATGAAATCAAGGAGGCATTGAGAGCACAGATGGAAGTGCAAAGTAAATTACATTTGCAAGTGGAGGCGGAAAAGCACTTGCAGATTCGCCAGGATGCAGAGAGGAGATACATGGCCATGCTTGAAAGAGCTTGCAAGATGCTGGCTGATCAATTTATCGGTGCTACAGTTATAGACACAGACAGCCAAAAGTTCCAAGGAATTGGAAGCAAAGCACCTAGAGGTGCCTTGGTGGATCCTCTTGGTTTTTACTCCTTGCCATCCACTGAGGTGGCTGGGGTGAATGTCCTGGAAGAAGAAATACCGCCAAGTCTCCCACCACAAAGGGCCGATTGTTCAACTGAAAGTTCTTTAACCTCACACGAGAGCTCTGGAGGATTGACTTTAGAAGGATCGCCAGGTGGGGGAAAAAGGAGGATGCTAGGCATGGACTCTATGGCAGCACCTTTGATCTGGAGTGAAGCTAAGATGAGAACTCAAGCCATCAATGTGGTCCAAGGTAATCATCCTCAAGGAATAACTAGGTATGGCATGTAG 972 0.4774 MYPRLIHPHDGIVTQDDMQGAASNLSHAHKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQRNETFLSELQKYRLGKQSGKDMGEGCKDGSYLLESPGTDNSSPKLPTSDTNEGYEIKEALRAQMEVQSKLHLQVEAEKHLQIRQDAERRYMAMLERACKMLADQFIGATVIDTDSQKFQGIGSKAPRGALVDPLGFYSLPSTEVAGVNVLEEEIPPSLPPQRADCSTESSLTSHESSGGLTLEGSPGGGKRRMLGMDSMAAPLIWSEAKMRTQAINVVQGNHPQGITRYGM 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0824 323 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 42 93 IPR006447 GO:0003677
Aed9g0824 323 MobiDBLite consensus disorder prediction 254 272 - -
Aed9g0824 323 Gene3D - 41 109 - -
Aed9g0824 323 SUPERFAMILY Homeodomain-like 42 95 IPR009057 -
Aed9g0824 323 MobiDBLite consensus disorder prediction 126 141 - -
Aed9g0824 323 MobiDBLite consensus disorder prediction 247 285 - -
Aed9g0824 323 MobiDBLite consensus disorder prediction 109 142 - -
Aed9g0824 323 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 2 323 IPR044848 GO:0003700
Aed9g0824 323 Pfam MYB-CC type transfactor, LHEQLE motif 147 192 IPR025756 -
Aed9g0824 323 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0824 Aed-Chr9 5744572 5749366 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0824 31 265 G2-like Transcription Factor Family AT3G24120 46.371 3.06e-59 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aed9g0824 Myb_CC_LHEQLE 2.2e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0824 - - gmx:100786397 577.785