Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0811 ATGAAATTAGAATTGCCAGAGAGGATTCACATTGCACTTGGGCTTGCAAGAGGTTTATCTTGGCTCCATAAAAGGTGCAAGATTGTCCATCTCAAATTAGATTCAGAGTGTGTCTTGCTGGACAAGAATTTTGAGCCAAAAATTTCCAATTTTGGCAAGGCTAAATTCGTAAACCAGACGGCTGAAGATCATGGTTTTGATGATAAAATCCTTCGTCTGCTTGAAGTTGCATGTGACTGTGTTAAGGCTTCGTTAAAGCAAAGGCCAAAGATGGTTGATATGCACAAAACTGTAATAGAATGTATTGGTTGA 312 0.3878 MKLELPERIHIALGLARGLSWLHKRCKIVHLKLDSECVLLDKNFEPKISNFGKAKFVNQTAEDHGFDDKILRLLEVACDCVKASLKQRPKMVDMHKTVIECIG 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0811 103 Gene3D Transferase(Phosphotransferase) domain 1 1 66 - -
Aed9g0811 103 Pfam Protein tyrosine and serine/threonine kinase 2 61 IPR001245 GO:0004672|GO:0006468
Aed9g0811 103 ProSiteProfiles Protein kinase domain profile. 1 103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0811 103 PANTHER RECEPTOR-LIKE PROTEIN 55 61 97 - -
Aed9g0811 103 PANTHER RECEPTOR-LIKE PROTEIN 55 2 61 - -
Aed9g0811 103 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 2 61 - -
Aed9g0811 103 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 61 97 - -
Aed9g0811 103 SUPERFAMILY Protein kinase-like (PK-like) 3 62 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0811 Aed-Chr9 5659513 5660052 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0811 1 56 Receptor kinase-like Gene Family AT1G53420 50.000 3.22e-12 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Aed9g0811 PK_Tyr_Ser-Thr 6.7e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0811 - - var:108341708 120.168