Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0804 ATGGAGTCGAAAACTAGTTCTAGAGCTCTCCCGAAACACCATCAGAAGACGGTTGGGATTCAAACCCTTGAGGCGAAAGACGTTGGGTCTTCTTTGCAGAAGACGGGGAAAACGGAGCTGGCTGCTCCTGTGGATTTATCAAAGTCTGCAGTGAACACGTCCAAGCTGAATACTGGAGAAATTGCTGAAACTAAGAAGTTAGGAGGTTTAACCCTAAAGGGGTCTGCTGATTCCTTGAACAATAAAAGTAGTTCTGGTGTTTCCTCATCTGTTCTCAACAAAGCAGATCGTGCTGCTAATGAGAACATAGGCTCACAGGAAAGCTCTATTGATCAAGACAAAAAGACATCGGAAGATGGAAGTGTGAAGAACAGTTCTGTTTCTGCCAAAGTTAGTGATGGGGCCAGCAGTCTTGCAAAGACAAGTGGGAGTGCCAAGATCAGCCACCGAGTCGATTTCGTTGAGAGTGGTAAGAGCAGTATTTGCAGAGGAAGCACAAGCAGTGATGTGAGTGATGAGAGTACTTGTAGTAGCTTTAGTAGCAGCATAAACAAACCTCATAAGGCAAATGACTTGAGATGGGAAGCTATCCAAGCAGTTCGAAGTAGAGATGGGTCGTTGGGTTTAGGTCACTTTAGATTACTGAAGAGGCTGGGTTGTGGGGATATTGGCAGTGTTTACCTCTCCGAGTTGAGTGGAACTAAATGTTACTTTGCAATGAAGGTAATGGACAAAGGGTCCCTAGCAAGTCGTAAAAAGCTACTTCGTGCTCAGACTGAACGAGAAATTCTGCAGTCTCTTGATCATCCTTTTCTCCCAACTTTGTACACCCATTTTGAGACAGAAAAATTCTCATGCTTGGTTATGGAGTTCTGCCCAGGTGGTGACCTCCATACTCTTAGGCAAAAGCAACCAGGGAAGCATTTTCCTGAGCAGGCAGTAAAATTTTATGTGGCAGAGGTCCTACTGTCTTTGGAGTATCTTCACATGCTTGGGATTGTCTACCGTGACCTTAAGCCAGAAAATGTTCTTGTTAGGGACGATGGACATATTATGCTCTCTGACTTTGACCTCTCCCTCCGATGTGCTGTTAGTCCGACCCTTGTTAAAACCTCATCCACAGATTCTGAGCCTTTAAGAAAGAATTCTGCTTACTGTGTCCAACCTGCATGTATTGAGCCACCTTCCTGCATCCAGCCATCCTGTGTTGCTCCTACCACGTGCTTTTCACCCCGCCTCTTCTCTAGCAAATCAAAGAAAGACCGGAAGCCGAAAACTGAAATTGGCAACCAAGTGAGTCCATTACCTGAGCTCATTGCAGAGCCTACCGATGCCCGGTCCATGTCATTTGTTGGAACTCACGAATACTTGGCACCGGAGATCATTAAGGGTGAAGGTCATGGGAGTGCAGTTGATTGGTGGACTTTTGGGATCTTTCTATATGAGCTGTTGTTTGGTAAAACACCTTTCAAGGGATCCGGTAACCGAGCAACGTTGTTTAACGTTGTCGGTCAGCCACTGCGATTTCCAGAAGCACCTGTTGTGAGTTTCGCAGCTAGGGATCTCATAAGGGGGTTGCTTGTAAAGGAACCTCAGCACAGATTGGCATACAAAAGAGGTGCTACTGAGATCAAGCAACACCCCTTTTTTGAAGGTGTGAATTGGGCATTGATCAGATGTGCTACCCCACCAGAGATACCAAAGGCTGTTGAGTTTGAAAAGATACCCTCACCAGCTTCATCAAGTGGTGGTGAAAAGGCTGTTAACCACATATCAATAGCTAATCAGAAAGGTTCTGATAATTATCTGGAGTTTGATTTCTTCTAG 1827 0.4532 MESKTSSRALPKHHQKTVGIQTLEAKDVGSSLQKTGKTELAAPVDLSKSAVNTSKLNTGEIAETKKLGGLTLKGSADSLNNKSSSGVSSSVLNKADRAANENIGSQESSIDQDKKTSEDGSVKNSSVSAKVSDGASSLAKTSGSAKISHRVDFVESGKSSICRGSTSSDVSDESTCSSFSSSINKPHKANDLRWEAIQAVRSRDGSLGLGHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKHFPEQAVKFYVAEVLLSLEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKTSSTDSEPLRKNSAYCVQPACIEPPSCIQPSCVAPTTCFSPRLFSSKSKKDRKPKTEIGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKAVEFEKIPSPASSSGGEKAVNHISIANQKGSDNYLEFDFF 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0804 608 MobiDBLite consensus disorder prediction 67 129 - -
Aed9g0804 608 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 3 608 - -
Aed9g0804 608 PANTHER FLIPPASE KINASE 1-RELATED 3 608 - -
Aed9g0804 608 SUPERFAMILY Protein kinase-like (PK-like) 188 570 IPR011009 -
Aed9g0804 608 MobiDBLite consensus disorder prediction 1 22 - -
Aed9g0804 608 SMART serkin_6 212 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0804 608 CDD STKc_phototropin_like 211 568 - -
Aed9g0804 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 333 345 IPR008271 GO:0004672|GO:0006468
Aed9g0804 608 Gene3D Transferase(Phosphotransferase) domain 1 444 568 - -
Aed9g0804 608 Gene3D Transferase(Phosphotransferase) domain 1 296 371 - -
Aed9g0804 608 Pfam Protein kinase domain 447 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0804 608 Pfam Protein kinase domain 213 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0804 608 Gene3D Phosphorylase Kinase; domain 1 210 295 - -
Aed9g0804 608 MobiDBLite consensus disorder prediction 74 110 - -
Aed9g0804 608 ProSiteProfiles Protein kinase domain profile. 212 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0804 Aed-Chr9 5608555 5612992 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0804 36 608 AGC Kinase Gene Family AT5G47750 77.526 0.0 873
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Aed9g0804 Pkinase 5.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0804 K08286 - gmx:100798088 1120.53