Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0788 ATGGACCTCTTCGCGGCCGACCACTTCCCTGTCCCCGACCACGTGGCTCCGTTCCCTGATTCCGGCGACCTACTCTTCGCCGCCGACCTCCTCTCCCACCGCCACAACCCCCAGAAGCTCCGCCCCATCAGGTCTGCCCACCCTCCTCCGCCCCCTCACCCACTGGATCCGACTCCCTCCGGGTCGGGTCACGCCCCATGCCACCAATCCAGCACGTCTTTGGATGCTGAGGAAGAGGATGAGGATGATGACAATTCATCAGCACGTACTGAAGGACATGGCTGTAGTAGAAAGAAGAGGAGAAGGACGGCTAAAAGGCTCGAAGATTTTGTGAAGGATTTGGTGACGAAAGTGATGGAAAAGCAAGAGCAGATGCACAAACATTTGGTGGAAATCCTAGAAAACAAGGAGAAGGAAAGGATAAAGAGAGAAGAAGCTTGGAAGAACGAGGAAATGGAGAGAATCAGAAAAGATGAAGAGGCTAGAGCCCGAGAAAACTCTCGCAATTTGGCCCTCATATCCTTCATTCAGAATCAGTTGGGCTATGAAATTCGAATTCCCCAACAACCAGTAGTAGAGCCATGCAGCAAAAGAGAAGAGGAGGAAGTTGAGTTGGGTGCTAGAAAAGATTTGAACAGTGATCCAAGTAACAATAGATGGCCTGATGTTGAAGTGCAAGCACTCATCACTATGAGAACTTCATTGGAGCACAAGTTTCGTCTAATGGGATCAAAAGGATCAATGTGGGAGGAGATATCTGAAGCAATGAATGGAATGGGGTACAACCGCTCTGCAAAGAAATGTAAGGAGAAGTGGGAAAACATCAACAAGTACTATAAAAGGACAATAGGAAGTGGCAAGAAAAGGCGTCAAAATAGTAAAACTTGCCCTTACTTTCATGAGTTGGACATTCTGTATAGAAATGGTCTTCTAAGTATCGCAAATGCCTTGAGCAATACCAGTGATGTTCCTCAGATTGAAGAAAAGAAGTAG 993 0.4753 MDLFAADHFPVPDHVAPFPDSGDLLFAADLLSHRHNPQKLRPIRSAHPPPPPHPLDPTPSGSGHAPCHQSSTSLDAEEEDEDDDNSSARTEGHGCSRKKRRRTAKRLEDFVKDLVTKVMEKQEQMHKHLVEILENKEKERIKREEAWKNEEMERIRKDEEARARENSRNLALISFIQNQLGYEIRIPQQPVVEPCSKREEEEVELGARKDLNSDPSNNRWPDVEVQALITMRTSLEHKFRLMGSKGSMWEEISEAMNGMGYNRSAKKCKEKWENINKYYKRTIGSGKKRRQNSKTCPYFHELDILYRNGLLSIANALSNTSDVPQIEEKK 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0788 330 MobiDBLite consensus disorder prediction 40 103 - -
Aed9g0788 330 CDD GT1 218 282 - -
Aed9g0788 330 MobiDBLite consensus disorder prediction 43 59 - -
Aed9g0788 330 Coils Coil 149 169 - -
Aed9g0788 330 ProSiteProfiles Myb-like domain profile. 212 276 IPR001005 -
Aed9g0788 330 Gene3D - 220 281 - -
Aed9g0788 330 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 64 326 - -
Aed9g0788 330 Coils Coil 119 139 - -
Aed9g0788 330 PANTHER - 64 326 - -
Aed9g0788 330 Pfam Myb/SANT-like DNA-binding domain 218 303 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0788 Aed-Chr9 5469805 5472247 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0788 24 308 Trihelix Transcription Factor Family AT5G47660 37.069 5.49e-54 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aed9g0788 Myb_DNA-bind_4 4.3e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0788 - - gmx:100820302 532.332