Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0786 ATGGCTGAGTCGGATGACAACGAGTCAGGAGGAGGTCACACGGGGTGCAGGGAGCAAGACAGGTTCCTTCCGATAGCGAACGTGAGCAGGATAATGAAGAAGGCGTTGCCGGCGAACGCGAAGATCTCGAAGGAAGCAAAGGAGACGGACTATGGCTTTGTTTCCTCATCCATCGCAGTTTCAGATTTTATATATCTTGTTTGA 204 0.5049 MAESDDNESGGGHTGCREQDRFLPIANVSRIMKKALPANAKISKEAKETDYGFVSSSIAVSDFIYLV 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0786 67 Gene3D Histone, subunit A 12 60 IPR009072 GO:0046982
Aed9g0786 67 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 22 49 IPR003958 -
Aed9g0786 67 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 59 IPR027113 GO:0001228|GO:0006355|GO:0016602
Aed9g0786 67 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y PROTEIN 1 59 - -
Aed9g0786 67 SUPERFAMILY Histone-fold 17 54 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0786 Aed-Chr9 5461566 5462450 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0786 1 67 CCAAT-HAP3 Transcription Factor Family AT4G14540 61.429 1.84e-20 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0786 K08065 - gmx:100778034 80.4925