Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0775 ATGACGTCCATACCTGCGAAAAACATATGTATTCGGAGGCAACAATGCCCTTGTGGAGATTGGAAGTGTTATATTACATATGAGGGTGATGCTGAGGAGGGTTCTGCAGCACCTGAATTAGTGAAGGTAGAGAAAGCATCTTCTGGGGCTATGGTTACTCCCAATGTTGGAATGGTGTTTAAGAGTGATGATGATGCTTTTGAGTATTATGGAAATTTTGCTAGGAAGAATGGGTTCTCTATTAGGAAGGAAAGATCTAGAATTAGCCCTCAGTTGGGGATTTACAAGCGTGACTTTGTTTGTTACCGGTCTGGCTTTGCCCCGGTGAAGAAGAAGCCTAATGGAGAACACCATAGAGATAGGAAATCGGTGAGGTGTGGATGTGATGCAAAGATGTATCTGTCTAAGGAGGTTGTAGAAGGGGTTTCCCAATGGTTTGTTGTGCAGTTTAGTAATGTGCACAATCATGAACTTTTGGAAGATGATCAAGTTCGCCTTTTGCCTGCGTATCGTAAGATTCATGAGGCTGATCAAGAGCGTATACTCTTGCTTTCCAAGGCAGGGTTTCCGATACATCGAATAGTGAAAATGCTTGAGCTGGAGAAGGGTATTCAAGGGGGGCAACTACCTTTCTTGGAAAGAGATGTGAGGAACTTTGTTCAAAACCGCAAGAAGGTTGTTCAAGAGAATGAGGCATTGCTCAGTGAGAAGAGAGAAAATGATGTATTGGAACTTCTTGAGGCGTGCAAAGCCATGAAAGAAGCAGATGATGACTTTGTTTATGATTTTACTGTGGATGCGAATGATAAGGTTGAAAATGTAGCTTGGTCATATAGCGACTCAGTCAATGCAAATGCTATGTTTGGTGATGTGGTTTATTTTGACACTTCTTATCGATTGGTCACTTATGGATTGCTTTTTGGAGTATGGTTTGGTCTTGATAGCTACGGTAGAACAATTTTTTTTTGCTGTGTTTTATTGCAGGATGAAACACTCCAATCCTTCTCATGGGCATTACAGACTTTTGTACGGTTCATGAGAGGAAGATGTCCACAAACTATTCTAACTGATCTAGACCCAGGGCTTAGAGATGCCATTAGAAGTGAATTTCCAGGAACTAAACATGTCATTCCTCAGTGGAATATTCTATACAAGGTACCCTGTTGGTTTTCTCCTCCTATGGGTTCCCGGTATGCAGAATTTAAATCTGAATTTGATGCCTTATTTCACATTGAGAATACAGACGAATTTGAACTTCAGTGGAGCCAGATGATTTCTGTGTTTGGACTTAATTCAGACAAACATACTGATTTATTATATTCTGTTCGAGTATCTTGGGCACAAGCCTATGTAAGAGGTTACTTTCTGGCTCAAATGGCAACAATAGCTTACTCAAAGTCTATAGATGCATTTTTGAAAGGTATCTTCACTGCACATACATGCTTGCGTAGCTTTTTTGAGCAGGTTGGCATTTCTGCAAGTTTTCAACTTCAAGCACACCAGGAGACTCAATATACTCATCTCAAAACTTGCATACCAATTGAAGAGCATGCACGGAGTATTCTCACACCTTTTGCTTTTAATGCCTTGCAGCAAGAGTTATTGTTGGCAATGCAATATGCTGCGTCCGAAATGGCCAATGGATCCTATATTGTTCGGCATTTCAAAAGGATGGATGGAGAATGGCTCGTAATATGGTTGGCTGAAGACGACCAGATACACTGCTCTTGCAAGGAATTTGAATCCTCAGGAATACTATGCAGGCATGCTCTCCGTGTATTTGTAATGAAGAATTACTTTCAGCTGCCTGATAAATACTTTTTAGGTAGATGGAGACGGGAATGCTCATTACTTCTTGATGATGATCAGAATAATCAAGGTGTTGGTGGGGAATGGTTTCAAGAATATCAGTCCCTATCTGAAACTTTATTTCAAGAATCATCAATTACGAAGGAGCGATCTGACTATGTTCGGAAAGAACTGACCAAAGAACTTACTAGGATTCTTAATGAGGTTAGAAATCTCCCGGAGGCTAATGGAGTCTGCATGAACATGTCTGTTTCACCAACCAACTAG 2076 0.4075 MTSIPAKNICIRRQQCPCGDWKCYITYEGDAEEGSAAPELVKVEKASSGAMVTPNVGMVFKSDDDAFEYYGNFARKNGFSIRKERSRISPQLGIYKRDFVCYRSGFAPVKKKPNGEHHRDRKSVRCGCDAKMYLSKEVVEGVSQWFVVQFSNVHNHELLEDDQVRLLPAYRKIHEADQERILLLSKAGFPIHRIVKMLELEKGIQGGQLPFLERDVRNFVQNRKKVVQENEALLSEKRENDVLELLEACKAMKEADDDFVYDFTVDANDKVENVAWSYSDSVNANAMFGDVVYFDTSYRLVTYGLLFGVWFGLDSYGRTIFFCCVLLQDETLQSFSWALQTFVRFMRGRCPQTILTDLDPGLRDAIRSEFPGTKHVIPQWNILYKVPCWFSPPMGSRYAEFKSEFDALFHIENTDEFELQWSQMISVFGLNSDKHTDLLYSVRVSWAQAYVRGYFLAQMATIAYSKSIDAFLKGIFTAHTCLRSFFEQVGISASFQLQAHQETQYTHLKTCIPIEEHARSILTPFAFNALQQELLLAMQYAASEMANGSYIVRHFKRMDGEWLVIWLAEDDQIHCSCKEFESSGILCRHALRVFVMKNYFQLPDKYFLGRWRRECSLLLDDDQNNQGVGGEWFQEYQSLSETLFQESSITKERSDYVRKELTKELTRILNEVRNLPEANGVCMNMSVSPTN 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0775 691 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 27 681 IPR031052 GO:0006355
Aed9g0775 691 SMART 26again6 573 600 IPR006564 GO:0008270
Aed9g0775 691 PANTHER FAR1-RELATED SEQUENCE 10 ISOFORM 1 27 681 - -
Aed9g0775 691 Pfam MULE transposase domain 291 382 IPR018289 -
Aed9g0775 691 Pfam SWIM zinc finger 571 597 IPR007527 GO:0008270
Aed9g0775 691 Pfam FAR1 DNA-binding domain 68 159 IPR004330 -
Aed9g0775 691 ProSiteProfiles Zinc finger SWIM-type profile. 563 598 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0775 Aed-Chr9 5399372 5405058 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aed9g0775 MULE 2.4e-15 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0775 - - gmx:100817107 1349.73