Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0772 ATGTCCGGTGGGGAGGTTGGTGGTGGCGGCGGTGTTTTCGTGACGTGGGAGGAGCGGGTGATATGTCAGGAACGTGGGAACCGAGTGATTCACTTCTACCTGAAGGACGCGTTGGGGAATTCGGTTCTGGCTGTGGTGGGGACTGAGAGGAGTGTGAGGCACATGATGTATGTTGTTCCTGACCATTTTTTGCAGGCTTATGGATCCACACAACCCATCAATGCCTGCAAATGGAGGGCAAGGAGAGAGGTTGTTGACTGGCTCACATGTTTGGTCTCGCGCAATCGCTCACACCATGCAGTTTATGTCATTCTTGCCTGCATGGCCACGTCAACTGGCTCACTTGTTTGGTCATGTGGAATAGCCACTACATATGCAGGTGTACAGCTGGATGATTCAGCACAAGCCAATGACTCTCTCAAGATTTTAATGCCTAGGATCAATTTCAGTAATAAAATTTTACCTGATAAAATGATTTCTAGGAAACTAAAATTCCAAAGGTCAGATATTGAATGGTCAGGCTTTACTTGGTTTTGTGCTAAACAGCTGAAGCACTACTCAGGGTTTTGCAGGAATGGAACAACCATAAATGTTCATTCGTTTGTATATATTATGAATGAAGAAGAAAACCACTATCTTGGTTACTTGGAAGATATGTATGAAGACAAGAAGAGACAAAAAAAAGTGAAGGTACGGTGGTTTCACCATGGTCAAGAAGTTAAGCATGTGATTCCACAGCTGAATCTGCAAGATGGAGAGGTTTTCATCACACCTCATGTTCAGGTGATCAGTGCTGAGTGTGTCAATGGTCCTGCAACAGTTTTGACTCCTAAACATTATGAGAAATACCTAGCCACTGTTCCTCATACATCTTTATCTGAGATCCATGTGTGCTTTAGGCAGTTTAAAAACAATAAGCTTAAACCCTTCACACTTACAAAGTTGCGTGGATATAGTAACCAAACTGTTCTTTCTAGTTTGAATAGTCCTACTCCCTCCAAGAGAAAGGCAAAGTTTGAAAAACTGCACACAGATGATGATGAGAACTTCACTCAAGATGATCCTTTAAGGTCCAGGAATAAAAGGAATAGAATTTCTAAGGATCATGCACTTGAAAAGGGTTTTTCTGGTCTGCAAATCTCTGTTCCTACGAATGAAATGACAAAATGTGAACCAAAATACCCTAGTTTAAAATTAAAACTATCAAGAAAAACAATGGGTATCAAGGTTATTGGACCAAAGCCTGAACTGTCTTTTCAAGTCAGTGCCAAGATAGAGGTTCTCTGTCAAGATAGTGGCATCAGAGGATGCTGGTTTAGATGTAAAATCTTGAGTATGTCTCCGAGGTTGCTGAAAGTCCAGTATGATGATTTGCTGGATATAGACGGACCACAGAAACTAGAGGAATGGGTCCCTGCATCTAAAGTGGCAGCTCCTGACAAATTGGGTATGCGATGTTCAGGCCGCTTAACAGTACGACCATGCCCTCCTGAATATAATACAGGTCATACTTTTGAGATTGGAGCACCAGTGGATGCCTGGTGGTGTGATGGATGGTGGGAAGGTGTCATAACTGCGGTTAATGTTAGTGGAGATGGAATCCTGCAGGTTTATACCCCTGGCGAAGAGAGGTTCCTAAAGGTTGAGAAGAAGAACATTCGGATTTCTCGAGATTGGATCAATAACAGGTGGGTTGATGTACAGGGAAAGCCTGACATTTGCAGCTATTTATCTTCAAATGTCAGGTCCAGCATCAGGATGTCAGCTAATTCTGCAGTGGTAGATGGATCTATGTCTGATTGCTCTGCAATGTTAGAAAGTAAACCATCACCAATTGCCAAAGTTGAAGTTGCTAAGAAGGTTGAGCCTGAATTATCTTGTTTGGAAGCACCTGTTGACCTGGAAAATATGAAGGGAATAACATTGAGGGAGCCACTCTATGCCATTCATGAAGACAAAGATAACAACTCTGGTGGTGGTTGTGATGATGAAGCTGACAAGGCTGTGGAGACACTTCTGGCCTTAAATGAATACAAGGATAAGAACTCAGGTGGAAGCAGCGATGGTGACACTGACAATGACGACGATGATGATGATGATAATGATAATGTTGACGATGATGCTGACAATGATGAAGAGGATAGTGAGGAAAATTTTGATTGTTCTGAAGCAAAACTCGGTGCAGCAGAAGCAATACAAGTTGCATGA 2208 0.4257 MSGGEVGGGGGVFVTWEERVICQERGNRVIHFYLKDALGNSVLAVVGTERSVRHMMYVVPDHFLQAYGSTQPINACKWRARREVVDWLTCLVSRNRSHHAVYVILACMATSTGSLVWSCGIATTYAGVQLDDSAQANDSLKILMPRINFSNKILPDKMISRKLKFQRSDIEWSGFTWFCAKQLKHYSGFCRNGTTINVHSFVYIMNEEENHYLGYLEDMYEDKKRQKKVKVRWFHHGQEVKHVIPQLNLQDGEVFITPHVQVISAECVNGPATVLTPKHYEKYLATVPHTSLSEIHVCFRQFKNNKLKPFTLTKLRGYSNQTVLSSLNSPTPSKRKAKFEKLHTDDDENFTQDDPLRSRNKRNRISKDHALEKGFSGLQISVPTNEMTKCEPKYPSLKLKLSRKTMGIKVIGPKPELSFQVSAKIEVLCQDSGIRGCWFRCKILSMSPRLLKVQYDDLLDIDGPQKLEEWVPASKVAAPDKLGMRCSGRLTVRPCPPEYNTGHTFEIGAPVDAWWCDGWWEGVITAVNVSGDGILQVYTPGEERFLKVEKKNIRISRDWINNRWVDVQGKPDICSYLSSNVRSSIRMSANSAVVDGSMSDCSAMLESKPSPIAKVEVAKKVEPELSCLEAPVDLENMKGITLREPLYAIHEDKDNNSGGGCDDEADKAVETLLALNEYKDKNSGGSSDGDTDNDDDDDDDNDNVDDDADNDEEDSEENFDCSEAKLGAAEAIQVA 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0772 735 SMART BAH_4 194 313 IPR001025 GO:0003682
Aed9g0772 735 Pfam BAH domain 195 290 IPR001025 GO:0003682
Aed9g0772 735 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 11 622 - -
Aed9g0772 735 ProSiteProfiles BAH domain profile. 194 313 IPR001025 GO:0003682
Aed9g0772 735 PANTHER BROMO ADJACENT-LIKE DOMAIN PROTEIN 11 622 - -
Aed9g0772 735 Gene3D - 177 392 IPR043151 -
Aed9g0772 735 MobiDBLite consensus disorder prediction 676 735 - -
Aed9g0772 735 MobiDBLite consensus disorder prediction 334 362 - -
Aed9g0772 735 MobiDBLite consensus disorder prediction 689 719 - -
Aed9g0772 735 MobiDBLite consensus disorder prediction 323 362 - -
Aed9g0772 735 Pfam Agenet domain 424 497 IPR008395 -
Aed9g0772 735 SMART agenet_At_2 417 482 IPR014002 -
Aed9g0772 735 SMART agenet_At_2 503 561 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0772 Aed-Chr9 5379832 5386854 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0772 431 559 PHD Transcription Factor Family AT5G58610 27.820 5.06e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0772 - - gmx:100816046 1226.85