LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed9g0772	ATGTCCGGTGGGGAGGTTGGTGGTGGCGGCGGTGTTTTCGTGACGTGGGAGGAGCGGGTGATATGTCAGGAACGTGGGAACCGAGTGATTCACTTCTACCTGAAGGACGCGTTGGGGAATTCGGTTCTGGCTGTGGTGGGGACTGAGAGGAGTGTGAGGCACATGATGTATGTTGTTCCTGACCATTTTTTGCAGGCTTATGGATCCACACAACCCATCAATGCCTGCAAATGGAGGGCAAGGAGAGAGGTTGTTGACTGGCTCACATGTTTGGTCTCGCGCAATCGCTCACACCATGCAGTTTATGTCATTCTTGCCTGCATGGCCACGTCAACTGGCTCACTTGTTTGGTCATGTGGAATAGCCACTACATATGCAGGTGTACAGCTGGATGATTCAGCACAAGCCAATGACTCTCTCAAGATTTTAATGCCTAGGATCAATTTCAGTAATAAAATTTTACCTGATAAAATGATTTCTAGGAAACTAAAATTCCAAAGGTCAGATATTGAATGGTCAGGCTTTACTTGGTTTTGTGCTAAACAGCTGAAGCACTACTCAGGGTTTTGCAGGAATGGAACAACCATAAATGTTCATTCGTTTGTATATATTATGAATGAAGAAGAAAACCACTATCTTGGTTACTTGGAAGATATGTATGAAGACAAGAAGAGACAAAAAAAAGTGAAGGTACGGTGGTTTCACCATGGTCAAGAAGTTAAGCATGTGATTCCACAGCTGAATCTGCAAGATGGAGAGGTTTTCATCACACCTCATGTTCAGGTGATCAGTGCTGAGTGTGTCAATGGTCCTGCAACAGTTTTGACTCCTAAACATTATGAGAAATACCTAGCCACTGTTCCTCATACATCTTTATCTGAGATCCATGTGTGCTTTAGGCAGTTTAAAAACAATAAGCTTAAACCCTTCACACTTACAAAGTTGCGTGGATATAGTAACCAAACTGTTCTTTCTAGTTTGAATAGTCCTACTCCCTCCAAGAGAAAGGCAAAGTTTGAAAAACTGCACACAGATGATGATGAGAACTTCACTCAAGATGATCCTTTAAGGTCCAGGAATAAAAGGAATAGAATTTCTAAGGATCATGCACTTGAAAAGGGTTTTTCTGGTCTGCAAATCTCTGTTCCTACGAATGAAATGACAAAATGTGAACCAAAATACCCTAGTTTAAAATTAAAACTATCAAGAAAAACAATGGGTATCAAGGTTATTGGACCAAAGCCTGAACTGTCTTTTCAAGTCAGTGCCAAGATAGAGGTTCTCTGTCAAGATAGTGGCATCAGAGGATGCTGGTTTAGATGTAAAATCTTGAGTATGTCTCCGAGGTTGCTGAAAGTCCAGTATGATGATTTGCTGGATATAGACGGACCACAGAAACTAGAGGAATGGGTCCCTGCATCTAAAGTGGCAGCTCCTGACAAATTGGGTATGCGATGTTCAGGCCGCTTAACAGTACGACCATGCCCTCCTGAATATAATACAGGTCATACTTTTGAGATTGGAGCACCAGTGGATGCCTGGTGGTGTGATGGATGGTGGGAAGGTGTCATAACTGCGGTTAATGTTAGTGGAGATGGAATCCTGCAGGTTTATACCCCTGGCGAAGAGAGGTTCCTAAAGGTTGAGAAGAAGAACATTCGGATTTCTCGAGATTGGATCAATAACAGGTGGGTTGATGTACAGGGAAAGCCTGACATTTGCAGCTATTTATCTTCAAATGTCAGGTCCAGCATCAGGATGTCAGCTAATTCTGCAGTGGTAGATGGATCTATGTCTGATTGCTCTGCAATGTTAGAAAGTAAACCATCACCAATTGCCAAAGTTGAAGTTGCTAAGAAGGTTGAGCCTGAATTATCTTGTTTGGAAGCACCTGTTGACCTGGAAAATATGAAGGGAATAACATTGAGGGAGCCACTCTATGCCATTCATGAAGACAAAGATAACAACTCTGGTGGTGGTTGTGATGATGAAGCTGACAAGGCTGTGGAGACACTTCTGGCCTTAAATGAATACAAGGATAAGAACTCAGGTGGAAGCAGCGATGGTGACACTGACAATGACGACGATGATGATGATGATAATGATAATGTTGACGATGATGCTGACAATGATGAAGAGGATAGTGAGGAAAATTTTGATTGTTCTGAAGCAAAACTCGGTGCAGCAGAAGCAATACAAGTTGCATGA	2208	0.4257	MSGGEVGGGGGVFVTWEERVICQERGNRVIHFYLKDALGNSVLAVVGTERSVRHMMYVVPDHFLQAYGSTQPINACKWRARREVVDWLTCLVSRNRSHHAVYVILACMATSTGSLVWSCGIATTYAGVQLDDSAQANDSLKILMPRINFSNKILPDKMISRKLKFQRSDIEWSGFTWFCAKQLKHYSGFCRNGTTINVHSFVYIMNEEENHYLGYLEDMYEDKKRQKKVKVRWFHHGQEVKHVIPQLNLQDGEVFITPHVQVISAECVNGPATVLTPKHYEKYLATVPHTSLSEIHVCFRQFKNNKLKPFTLTKLRGYSNQTVLSSLNSPTPSKRKAKFEKLHTDDDENFTQDDPLRSRNKRNRISKDHALEKGFSGLQISVPTNEMTKCEPKYPSLKLKLSRKTMGIKVIGPKPELSFQVSAKIEVLCQDSGIRGCWFRCKILSMSPRLLKVQYDDLLDIDGPQKLEEWVPASKVAAPDKLGMRCSGRLTVRPCPPEYNTGHTFEIGAPVDAWWCDGWWEGVITAVNVSGDGILQVYTPGEERFLKVEKKNIRISRDWINNRWVDVQGKPDICSYLSSNVRSSIRMSANSAVVDGSMSDCSAMLESKPSPIAKVEVAKKVEPELSCLEAPVDLENMKGITLREPLYAIHEDKDNNSGGGCDDEADKAVETLLALNEYKDKNSGGSSDGDTDNDDDDDDDNDNVDDDADNDEEDSEENFDCSEAKLGAAEAIQVA	735

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed9g0772	735	SMART	BAH_4	194	313	IPR001025	GO:0003682
	Aed9g0772	735	Pfam	BAH domain	195	290	IPR001025	GO:0003682
	Aed9g0772	735	PANTHER	AGENET DOMAIN-CONTAINING PROTEIN-RELATED	11	622	-	-
	Aed9g0772	735	ProSiteProfiles	BAH domain profile.	194	313	IPR001025	GO:0003682
	Aed9g0772	735	PANTHER	BROMO ADJACENT-LIKE DOMAIN PROTEIN	11	622	-	-
	Aed9g0772	735	Gene3D	-	177	392	IPR043151	-
	Aed9g0772	735	MobiDBLite	consensus disorder prediction	676	735	-	-
	Aed9g0772	735	MobiDBLite	consensus disorder prediction	334	362	-	-
	Aed9g0772	735	MobiDBLite	consensus disorder prediction	689	719	-	-
	Aed9g0772	735	MobiDBLite	consensus disorder prediction	323	362	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed9g0772	Aed-Chr9	5379832	5386854	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed9g0772	431	559	PHD Transcription Factor Family	AT5G58610	27.820	5.06e-07	51.6

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed9g0772	-		-	gmx:100816046	1226.85

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