Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0771 ATGTGCCCAGATTTTGACTTGTGTATAGAGTGCTTTTCTGTTGGAGCTGAGGTGCAACCTCATAAAAGCAACCACCCTTACAGGGTCATGGATAATTTGTCTTTCCCTCTTATTTGCCCAGACTGGAATGCTGATGATGAAATTTTGCTTCTAGAGGGTATTGAAATGTATGGCTTGGGAAACTGGCTAGAAGTTGCTGAGCATGTTGGAACCAAAAACAAAGAGTCATGCATAGAACACTATAAGAATGTATACTTGAGCTCCCCATTCTTTCCTGTTCCGGACATGTCTCATGTTGTTGGGAAAAACAGAAAAGAACTTCTTGCCATGGCAAAAGGGCAGGGTGAAGACAAGAAAGGAATTTCCATGGCAGATCTTAGTATTAAGGCAGAATCCCCCTTTTCTCCATCTAGAGCCAAGGTTGAAGATTCACATAAAGCTGGCTCTGCTAATCGTTTGTCTTCCAATTTGAATTCAGAGTCAGATGGCCCCTCGGGTAACACACATACTGCATCTGGTGCTAACCAAAAGGCATCTCATATGGGCCGGGGAAAAGGTGGTCCAGGAGTCATTAAAATGGAAGATTCTCAACTAGACAGAGATTTTGGAGGAAAAAAGCCAACTTCCTCTGGAAATGAAGGTCCTTCTTTAGTAGAATCGAGTGGTTATAATGCCAAAAGACAGGAATTTGATCCTGAATATGATAATGACGCTGAACAACTACTCGCTGAAATGGAATTTAAGGACACTGACAATGACGACGACCGAGACCTGAAACTACGGGTGTTGCGTTTCTATTCAAAAAGGCTTGATGAAAGAAAGCGTAGGAAGGATTTCATACTTGAAAGAAATTTGTTATACCCAAATCCATTTGAGAAGGATTTAACACCTGAGGAGAAGACAACATGTCGGAAATATGACTTATTCATGCGCTTTCATACTAAGGAGGAGCACGAGGAATTGCTTAGAACAGTTATCTCTGAACATAGAACTCGTAAAAGACTTCAAGAGCTTAAGGAAGCCCGGGCTGCTGGTTGCCGCAATTCAGCTGAAGCTGATAGATATCTGGCACAAAAGAGAAGAAGGGCAGCTGAAGAAAGTGCTCGTAGGACAAAAGAAAGTGCTCAAGTTGGCCCAAGCAATCAAGGGGTTCCTAATGCATTGATGTCTCCGGACTCTGCTGGCAAGGATTTGAGTGGAAGACCTGCAGGACCTGCTACTTCTAGTTCTGTCAATGAAATGGATGTGACGGGATACTATGGGGCAGATTTACTTTCTGAACCGGAGAAACGTTTATGCTGTGAGCTAAGGTTGCCTCCAGCCATATATCTAAAGATGCAAGAGCAACTGTCTCTACAAATACTTGCTGGCAATGTCACTGCAAAATCTGATGCTCATCAATTGTTCAAGATGGATGCCATGAAAATTGACAGGGTGTATGATATGCTCATTAAAAAGGGGATTGGTTCCCCCTGA 1476 0.4282 MCPDFDLCIECFSVGAEVQPHKSNHPYRVMDNLSFPLICPDWNADDEILLLEGIEMYGLGNWLEVAEHVGTKNKESCIEHYKNVYLSSPFFPVPDMSHVVGKNRKELLAMAKGQGEDKKGISMADLSIKAESPFSPSRAKVEDSHKAGSANRLSSNLNSESDGPSGNTHTASGANQKASHMGRGKGGPGVIKMEDSQLDRDFGGKKPTSSGNEGPSLVESSGYNAKRQEFDPEYDNDAEQLLAEMEFKDTDNDDDRDLKLRVLRFYSKRLDERKRRKDFILERNLLYPNPFEKDLTPEEKTTCRKYDLFMRFHTKEEHEELLRTVISEHRTRKRLQELKEARAAGCRNSAEADRYLAQKRRRAAEESARRTKESAQVGPSNQGVPNALMSPDSAGKDLSGRPAGPATSSSVNEMDVTGYYGADLLSEPEKRLCCELRLPPAIYLKMQEQLSLQILAGNVTAKSDAHQLFKMDAMKIDRVYDMLIKKGIGSP 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0771 491 PANTHER TRANSCRIPTIONAL ADAPTER ADA2B 1 490 IPR034318 GO:0003713|GO:0006357|GO:0035065
Aed9g0771 491 SMART sant 38 87 IPR001005 -
Aed9g0771 491 Gene3D - 36 87 - -
Aed9g0771 491 CDD ZZ_ADA2 2 30 IPR041983 -
Aed9g0771 491 MobiDBLite consensus disorder prediction 133 221 - -
Aed9g0771 491 CDD SANT 42 84 IPR001005 -
Aed9g0771 491 Gene3D - 1 30 IPR043145 -
Aed9g0771 491 Gene3D - 406 489 IPR036388 -
Aed9g0771 491 SUPERFAMILY Homeodomain-like 399 488 IPR009057 -
Aed9g0771 491 MobiDBLite consensus disorder prediction 148 177 - -
Aed9g0771 491 MobiDBLite consensus disorder prediction 357 412 - -
Aed9g0771 491 PIRSF Txn_adaptor_ADA2 1 491 IPR016827 GO:0003713|GO:0006357|GO:0035065
Aed9g0771 491 Pfam Myb-like DNA-binding domain 41 84 IPR001005 -
Aed9g0771 491 SUPERFAMILY RING/U-box 2 44 - -
Aed9g0771 491 ProSiteProfiles SANT domain profile. 37 89 IPR017884 -
Aed9g0771 491 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 42 89 IPR017930 -
Aed9g0771 491 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 1 490 - -
Aed9g0771 491 MobiDBLite consensus disorder prediction 357 372 - -
Aed9g0771 491 MobiDBLite consensus disorder prediction 373 388 - -
Aed9g0771 491 ProSiteProfiles SWIRM domain profile. 405 491 IPR007526 GO:0005515
Aed9g0771 491 ProSiteProfiles Zinc finger ZZ-type profile. 1 35 IPR000433 GO:0008270
Aed9g0771 491 ProSiteProfiles Myb-like domain profile. 42 85 IPR001005 -
Aed9g0771 491 SUPERFAMILY Homeodomain-like 35 88 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0771 Aed-Chr9 5373185 5378970 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0771 1 489 EF-hand Containing Proteins AT3G07740 46.047 1.39e-142 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed9g0771 Myb_DNA-binding 5.8e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0771 K11314 - gmx:100811887 912.524