Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0764 ATGCAAACGTCTCAGAAACACCCAACTTCAGCTGGTATCCATTTATACCACCAGCCTGCACAAGACGTTGATCCCTACACTCATTACCAAACATTACAAAGCAATTCCGGCCATGATAACAGCAGCCAGGGAACCACTATTTCTTTTGAAGCCAGCAAGGAGCAATACTTTACCCTTGAATCATCCCCAGCAATCAATGATCTCATAGGTTGTGATTCTCCTTCCTATGCTAGTGTATCATCCAATAGGAGTCCTTTTTCTCCACAAGCTTCTCATTCAGACCAGCATCAGTCATCTGACAACACCTATGGATATGGATCACCAACAAGTGCACAGTCGCACTCTAGTGCTGATGATAGCTACGAATTGAAGAACAAGCTTAGAGAACTTGAGATTTCATTGTTGGGGCCTGATTCAGATATTGTTGACAGTTATCACTGCTGCTACAAGGGTGGCCACCACGGAACATCTCAAATGGCTAAATACAATTGGGATCAGATTGTGGAAATGATTCCAAAATTAGACTTGAAAGACGTCCTCATTCGGTGTGCGCAGGCTGTGGCTGATGGTGATATTGAAACAGCAGTGGGATTTATGAACAATGTGTTGGCAAAGATGGTATCAGTTGGGGGTGATCCAATCCAGAGGCTAGGTGCTTACATGTTGGAGGGTCTAAGAGCAAGGTTGGAGTCCTCAGGGAGCATAATCTACAAAGCCTTGAAATGTGAACAACCAACAAGCAAAGATCTCATGACTTACATGCACATCCTGTACCAGATTTGCCCATATTGGAAGTTTGCTTACACATCTGCAAATGCTGTCATTGGAGAAGCAATGCTAAATGAATCAAGAATTCACATAATTGATTTCCAAATGGCCCAGGGCACTCAGTGGTTGTTGCTCATTCAGGCTCTTGCCTCTCGTCCTGGTGGACCACCTTTCATTCGTCTAACCGGTGTTGATGATTCCCAATCATTTCATGCAAGGGGTGGAGGACTTCACATTGTGGGAAAACGCCTCTCAGATTATGCCAAATCTTGTGGAGTGCCATTTGATTTCCACAGTGCTGCAATGTGTGGAAGTGAGGTTGAACTAGAAAACCTTGCGGTTCAACCCGGGGAAGCTCTAGTTGTGAACTTCCCTTTTGTTTTGCACCATATGCCAGATGAGAGTGTGAGCACAGAGAACCACAGGGACAGGTTATTGAGATTGGTCAAAAGCTTGTCACCCAAGGTTGTGACGCTTGTTGAGCAAGAATCCAACACCAACACTTCTCCCTTTTTCCAAAGGTTTGTTGAGACTTTGAGTTACTACACTGCTATGTTTGAGTCCATAGATGTGGCCCTCCCTAGAGATGATAAGCAAAGGATCAATGCAGAACAGCACTGTGTGGCTCGCGACATTGTCAACATGATAGCTTGTGAGGGTGATGAGAGGGTGGAAAGGCATGAACTCTTGGGGAAGTGGAGGTCAAGATTTTCAATGGCTGGTTTTGCACCATGCCCTTTGAGTCCCTCAGTCACAGCTGCAGTTAGAAGTATGTTAAAAGAATTCAATGAAAATTATAGGCTTGAACATGTAGATGGTGCTCTCTATCTAGGATGGAAGAATAGAGCTATCTGTACCTCTTCTGCTTGGAGATGTTACTGA 1650 0.4448 MQTSQKHPTSAGIHLYHQPAQDVDPYTHYQTLQSNSGHDNSSQGTTISFEASKEQYFTLESSPAINDLIGCDSPSYASVSSNRSPFSPQASHSDQHQSSDNTYGYGSPTSAQSHSSADDSYELKNKLRELEISLLGPDSDIVDSYHCCYKGGHHGTSQMAKYNWDQIVEMIPKLDLKDVLIRCAQAVADGDIETAVGFMNNVLAKMVSVGGDPIQRLGAYMLEGLRARLESSGSIIYKALKCEQPTSKDLMTYMHILYQICPYWKFAYTSANAVIGEAMLNESRIHIIDFQMAQGTQWLLLIQALASRPGGPPFIRLTGVDDSQSFHARGGGLHIVGKRLSDYAKSCGVPFDFHSAAMCGSEVELENLAVQPGEALVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFQRFVETLSYYTAMFESIDVALPRDDKQRINAEQHCVARDIVNMIACEGDERVERHELLGKWRSRFSMAGFAPCPLSPSVTAAVRSMLKEFNENYRLEHVDGALYLGWKNRAICTSSAWRCY 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0764 549 Pfam GRAS domain family 177 547 IPR005202 -
Aed9g0764 549 MobiDBLite consensus disorder prediction 79 118 - -
Aed9g0764 549 MobiDBLite consensus disorder prediction 79 120 - -
Aed9g0764 549 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 20 546 IPR005202 -
Aed9g0764 549 MobiDBLite consensus disorder prediction 1 48 - -
Aed9g0764 549 ProSiteProfiles GRAS family profile. 167 547 IPR005202 -
Aed9g0764 549 MobiDBLite consensus disorder prediction 24 48 - -
Aed9g0764 549 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 20 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0764 Aed-Chr9 5335145 5339332 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0764 1 547 GRAS Transcription Factor Family AT4G17230 59.455 0.0 636
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aed9g0764 GRAS 1.6e-127 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0764 - - gmx:100819190 1011.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2557 6 26634715 26636337 Aed9g0764 9 5335145 5339332 PCT