Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0760 ATGGTTTCGCTAGAGGAATCTCGCTCGAATTCGAGCCGTTTCCCGTTGCCGAGGAGTTACCCGTACCACTCTTCGGTTTCGTCCAAATCGCCGCGTCACATCGGAAGGTCCATGCGCACGATACGCTCCAGTTTCTTCCAAGACGACAACAGCAGCACCTGCTCCTTCACCGAGAAATCCACGTGTCTATCGGAGAACCTCACCGACTCCGTCGTCGACCTCCGTCTCGGCGAGCTCGCGTTGCGGAACAGCAAATCGGTGAATTCCTCGCCGGCGGAGGAGGACCTCCTCGATTTGTCGCAAGCCTTCAGCGACTTCTCCGCCTGCAGCAGCGACATCTCCGGCGAGCTGCAGCGCCTCGCGACCCTGCCGTCGCCGAAGAAAAGCGACGTCTCCGGCGAGAATGAAGCGCCGAAGCCGGAGATTGAGCCCTGCATGGGGTTCCTGCAGAGGGAGAACTTCTCCACTGAGATTATCGAGAGCATTTCGCCGGAGGATCTCCAGCCGACGGTGAAGCTTTGCATAGACGGCCTCCAGTCGCAGTCGGTGGCGGTGAAGCGCTCCGCGGCGGCGAAACTCCGCATGCTAGCGAAGAACCGCGCCGACAACCGCGTTCTGATCGCGGAGTCCGGCGCTGTCCCTGTCCTCGTTCCGCTTCTCCGGTGCAGCGATCCGTGGTCGCAGGAACACGCTGTCACCGCACTGTTAAACCTGTCTCTCCACGAGGACAATAAAATGCTGATAACCAATGCCGGAGCAGTGAAGGCGCTGATTTATGTGCTGAAGACCGGGACCGAAACTTCGAAGCAGAACGCAGCGTGCGCGCTTCTAAGCCTTGCTTTGGTGGAAGAGAACAAGAGTTCGATCGGGGCTTCAGGTGCGATACCGCCTTTGGTTTCGCTTCTTCTGAGCGGTTCGAACAGAGGGAAGAAGGACGCGCTGACGACACTTTATAAGCTGTGTTCGGTGAGGCAGAACAAGGAGAGGGCGGTGAGCGCCGGCGCGGTGAAGCCACTGGTGGAGCTGGTGGCGGAGCAGGGGAGCGGCATGGCGGAGAAGGCCATGGTGGTGTTGAACAGCCTGGCGGGGATTGAGGAAGGGAAGGAGGCGATTGTTGAAGAAGGTGGGATTGCTGCTCTTGTGGAGGCTATTGAGGATGGGTCTGTGAAGGGGAAGGAGTTTGCGGTTTTGACCCTTCTTCAGCTCTGTGTTGACAGTGTCACAAACAGAGGCTTTCTTGTTAGAGAGGGTGGGATTCCTCCTCTCGTTGCTCTTTCTCAAACTGGGAGTGTTCGAGCAAAGCACAAGGCTGAAACGCTTCTTCGATACTTGAGGGAATCAAGACAAGAGGCAGCATCTACTTCAAGTTCTTAG 1374 0.575 MVSLEESRSNSSRFPLPRSYPYHSSVSSKSPRHIGRSMRTIRSSFFQDDNSSTCSFTEKSTCLSENLTDSVVDLRLGELALRNSKSVNSSPAEEDLLDLSQAFSDFSACSSDISGELQRLATLPSPKKSDVSGENEAPKPEIEPCMGFLQRENFSTEIIESISPEDLQPTVKLCIDGLQSQSVAVKRSAAAKLRMLAKNRADNRVLIAESGAVPVLVPLLRCSDPWSQEHAVTALLNLSLHEDNKMLITNAGAVKALIYVLKTGTETSKQNAACALLSLALVEENKSSIGASGAIPPLVSLLLSGSNRGKKDALTTLYKLCSVRQNKERAVSAGAVKPLVELVAEQGSGMAEKAMVVLNSLAGIEEGKEAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLCVDSVTNRGFLVREGGIPPLVALSQTGSVRAKHKAETLLRYLRESRQEAASTSSS 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0760 457 PANTHER U BOX DOMAIN-CONTAINING 6 453 - -
Aed9g0760 457 Pfam Armadillo/beta-catenin-like repeat 202 239 IPR000225 GO:0005515
Aed9g0760 457 Pfam Armadillo/beta-catenin-like repeat 284 322 IPR000225 GO:0005515
Aed9g0760 457 Gene3D - 155 456 IPR011989 -
Aed9g0760 457 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 334 376 IPR000225 GO:0005515
Aed9g0760 457 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 4-LIKE 6 453 - -
Aed9g0760 457 SUPERFAMILY ARM repeat 166 445 IPR016024 -
Aed9g0760 457 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 211 253 IPR000225 GO:0005515
Aed9g0760 457 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 293 335 IPR000225 GO:0005515
Aed9g0760 457 MobiDBLite consensus disorder prediction 1 34 - -
Aed9g0760 457 SMART arm_5 364 404 IPR000225 GO:0005515
Aed9g0760 457 SMART arm_5 282 322 IPR000225 GO:0005515
Aed9g0760 457 SMART arm_5 200 240 IPR000225 GO:0005515
Aed9g0760 457 SMART arm_5 323 363 IPR000225 GO:0005515
Aed9g0760 457 SMART arm_5 406 446 IPR000225 GO:0005515
Aed9g0760 457 SMART arm_5 241 281 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0760 Aed-Chr9 5306859 5310427 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0760 110 449 U-box Gene Family AT2G23140 44.602 1.12e-81 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0760 - - gmx:100806768 816.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2554 6 26625653 26629012 Aed9g0760 9 5306859 5310427 PCT