Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0738 ATGGCGGGGTCATGTTTCCACGGGCTTAGGCTGAGGATGATGTCAAAGAGTAAACCTTTACCGGACCCTTCATCTTCAACCAAGAATAAGTTGGAGAATGACGCGGAGAACATGGAAAGGAAGAGATTTGATAGCATGGAATCGTGGTCATTGATATTGGACTCAATGGACACATGGGAGACTTCAAAGGAGGATGGGGAGCAAGATGTATGGACTGCAGACTTATCACAGCTTTTTATAGGTAACAAGTTTGCTTCTGGAGCTCACAGTCGAATTTACCGTGGAGTCTACAAGCAGAGAGCTGTTGCTGTGAAAATGGTGAAGATTCCAGCCCAGGATGATGAGACAAAGGGCTTACTAGAGGACCAATTTAACTTTGAAGTGGCTTTGCTTTCGCGTCTCATTCATCATAACATAGTGCAGAATGAAAGGCCTCCTCTGGCAGCTAGTTGTGAACCAGCAATAGCACATCTGATAAAGCGCTGCTGGTCAGCAAACCCGTCGAAACGGCCTGATTTCAGTGATATTGTCTCTACTTTGGAGAAGTACGATGAGTGTGTGAAAGAGGGCCTACCACTGAGTCTGAGTCATCATCATCATTCAGGGTCAGGCCTAGTCAGCACCAGAAATAATGTAATTATTGAACGCATCAAAGGCTGTGTATCAATGAGCTCCTCCATACCTGTACAAGCCTGA 696 0.4555 MAGSCFHGLRLRMMSKSKPLPDPSSSTKNKLENDAENMERKRFDSMESWSLILDSMDTWETSKEDGEQDVWTADLSQLFIGNKFASGAHSRIYRGVYKQRAVAVKMVKIPAQDDETKGLLEDQFNFEVALLSRLIHHNIVQNERPPLAASCEPAIAHLIKRCWSANPSKRPDFSDIVSTLEKYDECVKEGLPLSLSHHHHSGSGLVSTRNNVIIERIKGCVSMSSSIPVQA 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0738 231 Pfam Protein tyrosine and serine/threonine kinase 142 180 IPR001245 GO:0004672|GO:0006468
Aed9g0738 231 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 10 141 - -
Aed9g0738 231 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 141 206 - -
Aed9g0738 231 Coils Coil 28 48 - -
Aed9g0738 231 Gene3D Phosphorylase Kinase; domain 1 67 142 - -
Aed9g0738 231 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 141 206 - -
Aed9g0738 231 MobiDBLite consensus disorder prediction 15 39 - -
Aed9g0738 231 SUPERFAMILY Protein kinase-like (PK-like) 69 141 IPR011009 -
Aed9g0738 231 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 10 141 - -
Aed9g0738 231 Gene3D Transferase(Phosphotransferase) domain 1 143 201 - -
Aed9g0738 231 SUPERFAMILY Protein kinase-like (PK-like) 138 193 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0738 Aed-Chr9 5153293 5157468 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0738 141 222 MAP Kinase Kinase Kinase AT1G62400 64.634 3.66e-30 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Aed9g0738 PK_Tyr_Ser-Thr 2.2e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0738 - - gmx:100806033 233.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2537 6 26543697 26545008 Aed9g0738 9 5153293 5157468 PCT