Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0725 ATGGAGCGTTTGGCCAGGTCAGCTCGAACGTGGCGTTGGCATTGGCGTTCATTTTCCTCTTTCCAAACCCTAACTTCTCGCTCCTCACCCCGTTCTTCCTATTCCAAGTTTGCTTCTGCTTCCGACGTTTCGAGTTCAAGAGTTTACCGCGAGAATTATTCGCTGCTTCCAGTTTTCTTAGCTGGTGTTTTTGGAACGGGGTTGGCGGAAGCGGCATATGCAGAAGATAATGGTGCTGTGGATTTCCATGAAAGTGCTAAGAAGGAACGCGAGCGAATTCAGGAGTTGCTTAGAAGTAGAGGAATTCGATATGGTTCTTATCCTCGCTTCACTGTTGCTGTTAAAGGCCAAAAGTTTCAAATTCCTCCTGATTGTGAAGTTTCACAACTTATTGCAAATCTTACTGCACATCTTGGAACGAAAGCTGAAGGCCATGGTGGTGGTTCAGACATGTTATTACAAGCTTGGGACAGCACGTTTGCTTGGCAACTTACCCTTACTCATCCATCAAAAGAAAAACATATTCAAGAGAATGATCTGTCTTCAGCTGAGAGAGATTTATGTATACTCATATTTCATTCTCTCATTGGCTCAGAGAAGGCTGAAATTGAATTCATTAAGCAAGGTGACTTGAGTCCTGAAGAGCTTGATGCTTTCGTCTCTGTTTTACAATTAGCTGGTACCAAGTTGAGACAAAGAAACCCCCTGGAAAGAAAACCGAGGGAAGAGACTGAAAAAGTGCCATCTGTAGATAAGTCCATTTCTGATCTTAAGGGCATGGGAGTGAGAATTTATGGACTTGATGAACCCGTAGGTCTATCAAATGATGGTGAGATATCATGGGACAACATTGCTGGTTATGAACAACAAAAACGAGCAATAGAAGATACGATACTATTGGCTTTGCATAGTCCTGAAGTATATGATGATATTGCTCGAGCAACTCGTCATAAGTTTGAATCAAACAGACCTCGAGCTGTGCTATTTGAAGGTCCACCAGGTACAGGGAAAACTTCCTGTGCTCGTGTTATTGCCAATCAAGCGGGTGTCCCTTTGCTATATGTTCCACTTGAGTCAATAATGTCTGAGTTCTATGGTAAAAGTGAACGTCTTCTAGGGAAAGTGTTTTCGCTGGCGAACACTCTTCCTAATGGTGCTATTATATTTCTGGATGAGATTGATTCTTTTGCTGCTTCTCGTGACAATGAAATGCATGAAGCTACACGTAGAATATTGTCAGTCTTATTGCGACAGATAGATGGCTTTGAGCAGGATAAGAAAGTAGTTGTCATTGCTGCCACAAATAGAAAGGAAGATCTTGATCCTGCATTAATCAGTCGGTTTGATAGTATGATCGCTTTTGGCTTACCTGATCATCAGAATCGTCAGGAAATAATATCAAAATATGCAAAGCACCTGTCCAAATGCGAACTAGATGAACTTGCAAGAGTTACAGAAGATATGTCTGGAAGAGATATTAGAGATGTTTGTCAGCAAGCAGAACGATTGTGGGCGTCAAAGATAATTCGAGGGCAAGTTGTGAAAGACGGCGAAAAAGCACAGCTTCCATCTTTGCAAGAATATATAGAATGCGCCGCGAGTAGACAGGAGGCGCTGCGTAGTGCTGCCGCTGCCGCTGCCGCAAACAAGAAGGAACCGTTGGATATAAACGTAAGGCCAGGATTGCTGCAGGAGAGGATCCAAACGCCTTATTCTTAG 1719 0.4299 MERLARSARTWRWHWRSFSSFQTLTSRSSPRSSYSKFASASDVSSSRVYRENYSLLPVFLAGVFGTGLAEAAYAEDNGAVDFHESAKKERERIQELLRSRGIRYGSYPRFTVAVKGQKFQIPPDCEVSQLIANLTAHLGTKAEGHGGGSDMLLQAWDSTFAWQLTLTHPSKEKHIQENDLSSAERDLCILIFHSLIGSEKAEIEFIKQGDLSPEELDAFVSVLQLAGTKLRQRNPLERKPREETEKVPSVDKSISDLKGMGVRIYGLDEPVGLSNDGEISWDNIAGYEQQKRAIEDTILLALHSPEVYDDIARATRHKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLLYVPLESIMSEFYGKSERLLGKVFSLANTLPNGAIIFLDEIDSFAASRDNEMHEATRRILSVLLRQIDGFEQDKKVVVIAATNRKEDLDPALISRFDSMIAFGLPDHQNRQEIISKYAKHLSKCELDELARVTEDMSGRDIRDVCQQAERLWASKIIRGQVVKDGEKAQLPSLQEYIECAASRQEALRSAAAAAAANKKEPLDINVRPGLLQERIQTPYS 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0725 572 Pfam ATPase family associated with various cellular activities (AAA) 327 455 IPR003959 GO:0005524|GO:0016887
Aed9g0725 572 Gene3D - 457 560 - -
Aed9g0725 572 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 279 517 IPR027417 -
Aed9g0725 572 CDD AAA 309 456 - -
Aed9g0725 572 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 63 543 - -
Aed9g0725 572 SMART AAA_5 323 458 IPR003593 -
Aed9g0725 572 ProSitePatterns AAA-protein family signature. 428 447 IPR003960 GO:0005524|GO:0016887
Aed9g0725 572 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 63 543 - -
Aed9g0725 572 Gene3D - 270 456 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0725 Aed-Chr9 5046374 5052543 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0725 323 500 Calmodulin-binding Proteins AT3G56690 38.710 1.31e-28 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0725 - - gmx:100803362 932.939