Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0720 ATGGCTCGTGCTCGTTTCCCTCTTCCATTCCTTCTCTCTCTGCTCTTCGTTTCTCTTCCTCTTTCCCTCGCCAACACTGACCCTTCTGATGTTCAAGCTCTTGAGGTCATGTACAATGCGTTGAATAGTCCAACTCAGCTAACGGGTTGGAAAATCGGTGGTGGTGATCCTTGTGGAGAGTCATGGAAAGGGGTAACGTGTGAGGGATCAGCTGTTGTTTCCATTGACTTAAGTGACAATAAGATCCATGACACAATTCCCTACCAGTTGCCACCTAATCTTACAAGCCTGAATTTTGCAAGAAATAATTTATCTGGAAATCTTCCTTATTCCTTTTCTTCCATGGCTTCACTCAATTATTTGAATTTAAGCAATAATGTGCTCTCCATGACAGTTGGCGATGTTTTTGCTGGTCTTCAGGATCTTGGTACCCTGGATCTATCATTCAATAACTTCTCTGGGGATCTTCCTCCTTCACTTGGTGCATTGGCCAATCTTTCTTCTCTTTTCTTGCAGAAGAACCAGTTGACTGGCCCTCTTAGTGTTCTTGTTGGTTTGCCTTTGGATACTTTAAATGTTGCAAACAATAACTTCAGTGGATTGATACCTCATGAGCTTAGTTCCATCCATAATTTCATATATGATGGGAATTCTTTTGAGAACAGTCCGGCTCCTCTTCCACCAGCATTTGCTTCACCTCCTCCCAGTGGACCTCGTAGTCATCATCATTTTGGATCTGGTTCACATAATAAAACACAAGCTTCTGATAATGAAAAATCTGATAGCCATAAGGGTTTGACAGTGGGGGCTATCGTAGGTATTGTTTTAGGTTCAGTACTGGTGGCTGCTATTGTGCTCCTTGCTCTTGTTTTCTGTATCCAAAAGCAAAAGGGGAAGAAAAAGGGTGCAAGAAATTTTAGTGGCAGCCTTCCTGGTGGAGTTATTAATGTAACTCCTCAGATGCAAGAGCAGAGGGTAAAAAGTGCTGCTGTTGTTGCAAATCTCAAGCCTCATCCAGCAGAAAATGTGACAGTTGAGAGGGTAGCTGTAAAAAGTGGTTCTATAAAGCAGATGAAGTCCCCTATAACTTCCACATCATACACAGTTGCTTCTCTCCAAAGTGCAACAAATAGCTTTAGTCAAGAATTTATTATTGGTGAAGGTTCTCTTGGCCGAGTTTACAAGGCTGATTTCCCAAATGGGAAGGTAATGGCTATTAAGAAGATCGACAACTCGGCTCTGTCATTACAGGAGGAAGACAATTTTCTTGAAGCTGTTTCAAATATGTCACGCTTGCGGCACCCAAACATTGTGACATTGGCTGGATATTGTGCAGAGCATGGCCAACGACTTCTAGTTTATGAGCATATAGCAAATGGAAATCTGCATGACATGCTCCATTTTGCTGAAGATAGCAGCAAGGCTTTGTCTTGGAATGCCCGTGTACTGGCGTACTTGCATGAAGTGTGCTTGCCTTCCGTTGTACATAGAAATTTCAAATCTGCAAATATACTACTTGATGAGGAGCTCAATCCTCACCTGTCTGACTGTGGTTTAGCTGCTTTGACACCAAACACCGAGCGGCAGTTTAGTTCGCGTGTTCGATCAGAGCAGTCACTTGTGAGGTGGGCTACACCCCAACTCCATGATATAGATGCTTTGGCCAAAATGGTTGATCCTACTTTGAACGGCATGTATCCTGCAAAGTCACTGTCACGCTTTGCTGATATCATTGCCCTCTGTGTTCAGCCGGAACCTGAATTTCGACCTCCGATGTCCGAGGTGGTGCAAGCATTGGTTCGGTTAGTGCAAAGAGCAAGTGTGGTTAAAAGACGACCTAGTGAAGAATCTGGTGTTGGTCACAAGACCCCAGACCATGAGGCCATGGACATGTCATTTTAA 1902 0.4364 MARARFPLPFLLSLLFVSLPLSLANTDPSDVQALEVMYNALNSPTQLTGWKIGGGDPCGESWKGVTCEGSAVVSIDLSDNKIHDTIPYQLPPNLTSLNFARNNLSGNLPYSFSSMASLNYLNLSNNVLSMTVGDVFAGLQDLGTLDLSFNNFSGDLPPSLGALANLSSLFLQKNQLTGPLSVLVGLPLDTLNVANNNFSGLIPHELSSIHNFIYDGNSFENSPAPLPPAFASPPPSGPRSHHHFGSGSHNKTQASDNEKSDSHKGLTVGAIVGIVLGSVLVAAIVLLALVFCIQKQKGKKKGARNFSGSLPGGVINVTPQMQEQRVKSAAVVANLKPHPAENVTVERVAVKSGSIKQMKSPITSTSYTVASLQSATNSFSQEFIIGEGSLGRVYKADFPNGKVMAIKKIDNSALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEHIANGNLHDMLHFAEDSSKALSWNARVLAYLHEVCLPSVVHRNFKSANILLDEELNPHLSDCGLAALTPNTERQFSSRVRSEQSLVRWATPQLHDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRRPSEESGVGHKTPDHEAMDMSF 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0720 633 Pfam Leucine rich repeat 73 128 IPR001611 GO:0005515
Aed9g0720 633 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Aed9g0720 633 MobiDBLite consensus disorder prediction 224 262 - -
Aed9g0720 633 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 8 531 629 - -
Aed9g0720 633 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 8 24 531 - -
Aed9g0720 633 PANTHER OS01G0253100 PROTEIN 531 629 IPR045271 GO:0004714|GO:0006468
Aed9g0720 633 Gene3D Ribonuclease Inhibitor 27 237 IPR032675 -
Aed9g0720 633 Pfam Protein kinase domain 382 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0720 633 Gene3D Phosphorylase Kinase; domain 1 340 456 - -
Aed9g0720 633 PANTHER OS01G0253100 PROTEIN 24 531 IPR045271 GO:0004714|GO:0006468
Aed9g0720 633 SUPERFAMILY L domain-like 27 211 - -
Aed9g0720 633 MobiDBLite consensus disorder prediction 611 633 - -
Aed9g0720 633 Gene3D Transferase(Phosphotransferase) domain 1 457 532 - -
Aed9g0720 633 Gene3D Transferase(Phosphotransferase) domain 1 533 612 - -
Aed9g0720 633 ProSiteProfiles Protein kinase domain profile. 379 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0720 633 SUPERFAMILY Protein kinase-like (PK-like) 356 599 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0720 Aed-Chr9 5013502 5019722 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0720 115 633 Strubbelig Receptor Gene Family AT4G22130 62.369 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Aed9g0720 Pkinase 2.7e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0720 - - gmx:100781455 1055.05