Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0717 ATGATTACAAATACAAACAGAAAATCAAAAGCACCCCATATGCATGTTTTTCTTCTGTTAATTCAGTTATTGATTATTACAAGAGTCAAAGGTAGGTGCGTTACTGTCTGCAACCTTGCTCTAGCTTCCTATTACTTACCGGAAGGCACAAACCTCACTTACATTAGCAACCTCTTCGGAAAGCCCAAACCGGAGATTCTTAAATACAACCCCAGTGTTAAAAACCCCGACGTGATTATTCGCAACACGCGGATCAACGTGCCTTTTTCGTGTGACTGTTTGAACGATGCGTTTTGGGGGCACACTTTCTCGTACACGACCCAACACGGGGACACGTACAAGCTGGTCGCCAAGGTTGATTTCTCGAACCTCACGACGGAGGATTGGGTGAGAAGGGTCAACAACTACCCACCTAATCAGATGCCCGCAGACGTCAACATCAATGTCACCGTTAACTGCTCCTGCGGTAACCGACACGTTTCCAAGGATTATGGACTCTTCATGACGTACCCACTTCGGGTCGGTGATAGCTTGCAGGGGCTTGCGGCGGAATCCGGCGTGCCGGCGGAGCTGCTTCTCAGGTACAACCCCACCGCGGATTTCACTTCCGGGAATGGACTCGTGTTTGTGCCGGCGAAAGGAATATCTAGTGGAGCCATTGCTGGCATAGCTGTTGGAGGAAGTGTTGGGGTCTTAATTTTGGCCCTTCTTCTATATGTTGGACTGCACAGAAGAAGGAAAGTGGCTGAGGTACCCCTTCTCCCAGTCCCTGTGGCATCGGAAGATCATACTAGTCCACTCCATCATGGTATTGCTATCGGTCGTGGAAGCAGTTTGGACAAGGCATCAGAATCTTCTGTTGTTGCTTCTCCAAGGTTGACAGGGATTACGGTGGACAAGTCAGTGGAGTTCTCATATGAGGAGCTAGACAAGGCTACTGATGCCTTTAGTGTGGCTAATATAATTGGTCGAGGTGGGTTTGGATCTGTTTACTATGCTGAGCTTCGGAATGAGAAAGCTGCAATTAAAAAGATGGATATGCAAGCATCAAATGAATTCCTTGCTGAGTTAAAGGTTCTGACACACGTCCATCACTTGAACTTGGTGCGGTTAATAGGATATTGTGTTGAAGGCTCCTTATTTTTGGTTTACGAGTATATTGAGAACGGCAATTTAAGCCAACATTTGCGAGGCTCAGGGGGGAGGGATCCATTAACATGGGGAGCTAGAGTTCAAATTGCACTTGATGCAGCAAGAGGACTGGAATACATCCATGAACATACAGTTCCGGTCTACATCCATAGAGATATTAAATCAGCAAACATTTTGATAGACAAAAACTTTCGGGCAAAGGTTGCTGATTTTGGTCTGACAAAATTGACTGAGTATGGTAGTTCTTCATTACATACGCGTCTTGTGGGTACATTTGGTTATATGCCTCCAGAATATGCACAATACGGTGATGTTTCCTCCAAAATAGATGTATATGCTTTTGGAGTTGTTCTCTATGAACTCATATCAGGCAAGGAAGCTATCGTCAAGACAAAGGAACCTGAGAATGAATCAAAAGGACTAGTAGCCTTGGTTTTTGAAGAAGTTCTTGGTCTGTCAGACCCAAAAGAAGATCTTCGTCAACTTGTTGACCCTAGACTTGGTGACAACTACCCTCTTGACTCGGTATTTAAGGTGTCTCAGCTTGCCAAAGCATGTACACATGAAAACCCTCAAATTAGGCCAAGCATGAGATCAATTGTTGTTGCCTTAATGACACTTTCATCTTCAACTGAGGATTGGGATGTTGGCTCCTTCTATGAAAACCAAGCTTTAGTGCATCTAATGTCTGGAAGGTAG 1851 0.45 MITNTNRKSKAPHMHVFLLLIQLLIITRVKGRCVTVCNLALASYYLPEGTNLTYISNLFGKPKPEILKYNPSVKNPDVIIRNTRINVPFSCDCLNDAFWGHTFSYTTQHGDTYKLVAKVDFSNLTTEDWVRRVNNYPPNQMPADVNINVTVNCSCGNRHVSKDYGLFMTYPLRVGDSLQGLAAESGVPAELLLRYNPTADFTSGNGLVFVPAKGISSGAIAGIAVGGSVGVLILALLLYVGLHRRRKVAEVPLLPVPVASEDHTSPLHHGIAIGRGSSLDKASESSVVASPRLTGITVDKSVEFSYEELDKATDAFSVANIIGRGGFGSVYYAELRNEKAAIKKMDMQASNEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSQHLRGSGGRDPLTWGARVQIALDAARGLEYIHEHTVPVYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGSSSLHTRLVGTFGYMPPEYAQYGDVSSKIDVYAFGVVLYELISGKEAIVKTKEPENESKGLVALVFEEVLGLSDPKEDLRQLVDPRLGDNYPLDSVFKVSQLAKACTHENPQIRPSMRSIVVALMTLSSSTEDWDVGSFYENQALVHLMSGR 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0717 616 TIGRFAM GlyGly_CTERM: GlyGly-CTERM domain 226 246 IPR020008 -
Aed9g0717 616 SUPERFAMILY Protein kinase-like (PK-like) 296 588 IPR011009 -
Aed9g0717 616 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 13 616 IPR044812 GO:0019199|GO:0045087
Aed9g0717 616 Pfam Protein tyrosine and serine/threonine kinase 319 587 IPR001245 GO:0004672|GO:0006468
Aed9g0717 616 Gene3D Transferase(Phosphotransferase) domain 1 387 600 - -
Aed9g0717 616 SMART serkin_6 316 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0717 616 ProSitePatterns Protein kinases ATP-binding region signature. 322 344 IPR017441 GO:0005524
Aed9g0717 616 ProSiteProfiles Protein kinase domain profile. 316 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0717 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 432 444 IPR008271 GO:0004672|GO:0006468
Aed9g0717 616 Gene3D Phosphorylase Kinase; domain 1 289 386 - -
Aed9g0717 616 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-LIKE 13 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0717 Aed-Chr9 4994688 5000149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0717 19 616 Receptor kinase-like Gene Family AT3G21630 54.984 0.0 651
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Aed9g0717 PK_Tyr_Ser-Thr 5.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0717 - K13429 gmx:100802308 1025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0717 9 4994688 5000149 Aed9g0717 9 4994688 5000149 ECH