Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0716 ATGAAAATTGCATTTCCAAGACAAGAAAAGTCAAATCGTCAGACTGACGATAAGTTGAAGAAGTTCTCAAGGCACTCAAATTCCTTTGGAATTCGAAAGAAACAAAATGATCAATATGCTTATAAGAGTCCAAGATCAATAGAAAAAGACACAATGTCCTGTGTAAAGAACAGTACTGCACTAGGATTGGAACTTTCTGTTGTACTAGGAGAACAGTCAAAGTCAAACCAATGTACTGATAACCTTACATACAAAATCCCAAGACGCCGGAGAAATTTTGGATCTTCAAAGGAGAGAAAGGTTCACGATACTCACAAACTTGATATTATAAAATCAAAGTCAATGGGGGAAGAAGATATTTTGGTTTGTTCAAAGAGGACTACTGAACTTCCATTTAGGACAGAGCCAAAGAAGTGTCTTGCTGCATTAAAGAGGAAAAGAAAATTTGAAGACAGTATCTTAATTAACAATTTGGAAGATGATAAAGTTTATGTTCCTTCAGAGACAAATTCCAGAAGCAAGACTAGAAAAATTGATGATGTAAAGGATACTGGACAAACTTCAAGAGCATGTCATCAGTGCATGAAAAAGGAAAGAGCAGGATATGTACCTTGTACTAAATGTCAGAAAATGTATTGTCTGTGGTGCATCAGGAAATGGTATCCCGATTTGTCAATAGAAGATATTGCACAAGAGTGTCCCTTTTGCCAAAAGAATTGCAATTGCAATGCTTGCTTGTGTTCAAGAGGAATGATTAAGACATCTAACAAGAGCATCAGAGATGATGAAAAGGTTCAGTATCTTCAATACACGATTAACTTGCTCCTTCCGTTTATACAACAAATTTGTGAAGAACAAAGTCAAGAGCAAGAGATTGAAGCTAAAATACAAGGAAAATCAAGTTCTGAAATTGAGATACCACAAGTTCCTTGTGGTGAAAATGAACGTATCTATTGTGACCATTGTGCTACTTCATTTACTGACCTTTATCGAAGCTGCCCCAAGTGTTCCATTGAAATCTGCCTTAATTGTTGCAAAGAAATACGCAATGGAAGTATATCACCCCGGTCTGAACTGAAGTTTCAATATGTGAATAGAGGCTATGATTATATGCAAGGTGGTAATCCTTTACCAGTGTCTTGTGATTTAAGGACTTCAAAAGGTCATAATAGAGAGATATTTACCAAATGGAGTGCTAACGGTGATGGAAGTGTTAGATGTGCTCCAAAAGAAATGGGGGGCTGTGGTGGCTCTGTGTTGGAGCTGAAGCGCATGTTTCCAAATGGATGGATATCAGACTTAGAAGCCAAAGCTCGTAACATGCTAAAAACATTTTGCAAAACTGAACAAACAACTCTTCAGAAAGAAGCAGTATCATCAAGTTGCAATTCTATGATGAGAGCAGCTTTTAGAGATGGCACAAATGATAATAACTTATACTGTCCATTGTCAAGTGACGTCATCAATGAAGGGCTAGTTCTCTTCCAAAAACATTGGACTAAGGGTGAACCAATCATAGTTCGCGATGTTCTTAAGCAGGGGACTGGTCTGAGTTGGGAACCAATGGTCACATGGCGAGCACTATGTGAAAATGTGGTTCCAGGGATCAGCTCAAATATGTCAGAAGTGAAGGCCATTGATTGCTTGGCTTGTTGTGAGGTAGAAATCAACACTCGTATGTTCTTTAAGGGTTACACGCAAGGAAGAACATATAGAAATCTCTGGCCAGAGATGCTGAAGCTAAAAGACTGGCCCCCCTCTGACAAGTTTGAAGATCTTTTGCCTCGCCATTGTGATGAATTTATCCTCTGCTTGCCATTTCAAGAGTATAGCGATCCTCGAGCTGGAATCCTCAACCTTGCTGTAAAGTTGCCACCCCATGTCCTAAAGCCAGACTTGGGTCCAAAAACATATATTGCTTATGGGAATGAAGAAGAGCTTGGCAGGGGAGATTCAGTAACAAAACTTCACTGTGATATGTCTGATGCTGTGAATATTTTGACTCACACATCTGAGGTAACATTAACTGATGAACAGAACTATGTTATTTCAAAACTGAAAAAAGCACACATGGCCCAAGATGAGAAAGAGCACCGTGCTCGAGAAAGGGTTAATGAATGCCTGAATGAAGGACCTTGCAAATACAACAGAGAACAAGGGAATAAAAAATGTCCTGGTAACATCAATGGAAAGATCTTTCCAAATGATATGCTCACAATCTCCAGAGAAACAACAGAAACAGGTGGTGCTCTTTGGGACATCTTTCGGAGAGAGGATACCAATTTGTTAGAAGCATATCTAAGGAAACATTCAAAAGAATTTAGGCATACTTATTGTTCTCCAGTTGAACAGGTTGCCCATCCAATTCATGACCAATGTTTTTACTTGACTTTGGAACACAAGAAGAAGTTGAAGGAAGAGTTTGGTGTAGAACCTTGGACTTTTGAGCAGAAACTTGGGGAGGCAGTATTTATTCCTGCTGGGTGTCCACACCAAGTCAGGAATCTTAAGTCATGCACAAAAGTTGCTGCAGACTTTGTGTCCCCAGAAAATGTTCATATGTGCCTACATTTAACTGAAGAGTTTCGCCAACTTCCTAAGAATCACAAGGCCAGAGAAGATAAACTTGAGATAAAGAAGATGATAATCTATGCAGTTGACCAGGCTGTCAAAGAATTAGAAGCTTTAGTTGGGTGTTCTTGA 2703 0.3903 MKIAFPRQEKSNRQTDDKLKKFSRHSNSFGIRKKQNDQYAYKSPRSIEKDTMSCVKNSTALGLELSVVLGEQSKSNQCTDNLTYKIPRRRRNFGSSKERKVHDTHKLDIIKSKSMGEEDILVCSKRTTELPFRTEPKKCLAALKRKRKFEDSILINNLEDDKVYVPSETNSRSKTRKIDDVKDTGQTSRACHQCMKKERAGYVPCTKCQKMYCLWCIRKWYPDLSIEDIAQECPFCQKNCNCNACLCSRGMIKTSNKSIRDDEKVQYLQYTINLLLPFIQQICEEQSQEQEIEAKIQGKSSSEIEIPQVPCGENERIYCDHCATSFTDLYRSCPKCSIEICLNCCKEIRNGSISPRSELKFQYVNRGYDYMQGGNPLPVSCDLRTSKGHNREIFTKWSANGDGSVRCAPKEMGGCGGSVLELKRMFPNGWISDLEAKARNMLKTFCKTEQTTLQKEAVSSSCNSMMRAAFRDGTNDNNLYCPLSSDVINEGLVLFQKHWTKGEPIIVRDVLKQGTGLSWEPMVTWRALCENVVPGISSNMSEVKAIDCLACCEVEINTRMFFKGYTQGRTYRNLWPEMLKLKDWPPSDKFEDLLPRHCDEFILCLPFQEYSDPRAGILNLAVKLPPHVLKPDLGPKTYIAYGNEEELGRGDSVTKLHCDMSDAVNILTHTSEVTLTDEQNYVISKLKKAHMAQDEKEHRARERVNECLNEGPCKYNREQGNKKCPGNINGKIFPNDMLTISRETTETGGALWDIFRREDTNLLEAYLRKHSKEFRHTYCSPVEQVAHPIHDQCFYLTLEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAADFVSPENVHMCLHLTEEFRQLPKNHKAREDKLEIKKMIIYAVDQAVKELEALVGCS 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0716 900 ProSiteProfiles Zinc finger RING-type profile. 191 237 IPR001841 -
Aed9g0716 900 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJC) DOMAIN PROTEIN 28 899 - -
Aed9g0716 900 CDD cupin_RmlC-like 787 835 - -
Aed9g0716 900 SUPERFAMILY Clavaminate synthase-like 494 899 - -
Aed9g0716 900 Gene3D Cupin 474 872 - -
Aed9g0716 900 ProSiteProfiles JmjC domain profile. 613 863 IPR003347 -
Aed9g0716 900 Pfam JmjC domain, hydroxylase 741 846 IPR003347 -
Aed9g0716 900 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 28 899 IPR045109 GO:0032454|GO:0033169
Aed9g0716 900 SMART cupin_9 594 863 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0716 Aed-Chr9 4988374 4992473 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Aed9g0716 JmjC 5.4e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0716 K15601 K21989 gmx:100801772 1458.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0716 9 4988374 4992473 Aed9g0716 9 4988374 4992473 ECH
Aed6g2524 6 26458129 26464120 Aed9g0716 9 4988374 4992473 PCT