Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0705 ATGGACAAAGCTGGATGGGGACTCACCCTTGATACCTCTTCCTCTCAATCCCAGCTTCCATTATTCCCTTCCAACGACAATAGGATGTTCCCTCTCCTCGGATTCCCCGTCAACCTTAGCCGCGCCACCAAGGAAGTCGACGATGATAACCGCAAAGTCTTCCTAGGTGAAGTCGATTTCTTCTCTGATAGAAACAAACCAACACCCTCCCACGTTAAACCCCACATCGTCAAGAAGGAAATTGATCATGAAACTCAAACACCACTTCACGTTAATACTGGTTTACAACTCCTCACCGCTAACACTGGAAGTGACCAATCTACCGTCGATGATGGCCTCTCATCTGATGCGGAAGCCAAAACCAGTACTGAGCTTGCACAGTTGCAAGTGGAGCTTCAACGCATGAACTCTGAGAACAAGAAGCTGAAAGAGATGCTCAGCCATGTGACCGGTAACTACACGGCTTTGCAGATACATCTTGTCACATTAATGCAACAGAACCGCCCAACAGAAAATGAGGGAAAGGATGAGGATAAAAGCCATGGTGGAGGAAAGGTACCGAGACAGTTCCTTGATATGGGTCCCAGTGGCACAGCCGAAGTAGATGATCGAGTTTCCGATTCTTCTTCCGATGAAAGAACACGATCGAGCACACCTCAGAACAATACCATTAATGAAGCTGGAACAAGAAATAATAATGGTAAAACCGAGTTGGGTAGGGAAGAGAGTCCAGACTCAGAATCACAAGCTTGGGGTCCCAACAAGCTTCAGAAACTCAACCCTTCCACTGCCATGGATCAATCCACTGCAGAAGCCACAATGAGAAAAGCTCGTGTCTCAGTCCGTGCCCGATCAGAAGCTCCCATGATCAGTGATGGGTGCCAATGGAGAAAATATGGACAAAAAATGGCTAAGGGGAATCCATGCCCTCGAGCATATTACAGATGCACTATGGCTGTTGGTTGCCCAGTTCGCAAACAAGTTCAACGCTGTGCTGAGGATAGAACAATTTTGGTGACAACATATGAAGGAACACATAACCATCCACTGCCACCTGCTGCTATGGCCATGGCATCAACCACTGCAGCTGCTGCTAGCATGCTGCTGTCAGGGTCAATGTCCAGTGCAGATGGAATAATGAACCCAAATTTGCTAGCTAGAGCAATTCTTCCTTCTTGCTCTACAAGCATGGCAACACTTTCAGCTTCAGCACCATTCCCCACTGTGACTTTAGACCTCACACACAACACCCCGAATCCATTGCAATTTCAAAGACCTGCTGCCCCATTTCAACTACCCTTCCTCCAAGCACAGCCTCAGAACTTTGTGTCCGGAGCCACCCCAATTGCACAAGCACAAGCACTTTATAATCAATCAAAATTCTCTGGTCTTCAGTTATCTCAGGATGTTGGATCTTCCCAATTAGCCCCACAAGCTCCTAGACCACCCTTGCAACCAAGCCAACAGCCCTCACTGGCTGACACAGTCAGTGCCGCTGCCTCCGCCATCACCGCCGATCCAAACTTCACCGCCGTGCTTGCCGCCGCCATCTCCTCCATCATTGGCGGTGCTCAGAATTCAAACCACAACAACAACAACAATAACACAAGCAGGAATAGCATTAGCAGCTTTTCAGGAAACTGA 1644 0.4824 MDKAGWGLTLDTSSSQSQLPLFPSNDNRMFPLLGFPVNLSRATKEVDDDNRKVFLGEVDFFSDRNKPTPSHVKPHIVKKEIDHETQTPLHVNTGLQLLTANTGSDQSTVDDGLSSDAEAKTSTELAQLQVELQRMNSENKKLKEMLSHVTGNYTALQIHLVTLMQQNRPTENEGKDEDKSHGGGKVPRQFLDMGPSGTAEVDDRVSDSSSDERTRSSTPQNNTINEAGTRNNNGKTELGREESPDSESQAWGPNKLQKLNPSTAMDQSTAEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILVTTYEGTHNHPLPPAAMAMASTTAAAASMLLSGSMSSADGIMNPNLLARAILPSCSTSMATLSASAPFPTVTLDLTHNTPNPLQFQRPAAPFQLPFLQAQPQNFVSGATPIAQAQALYNQSKFSGLQLSQDVGSSQLAPQAPRPPLQPSQQPSLADTVSAAASAITADPNFTAVLAAAISSIIGGAQNSNHNNNNNNTSRNSISSFSGN 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0705 547 MobiDBLite consensus disorder prediction 471 490 - -
Aed9g0705 547 SMART WRKY_cls 290 350 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed9g0705 547 MobiDBLite consensus disorder prediction 170 185 - -
Aed9g0705 547 Pfam WRKY DNA -binding domain 292 349 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed9g0705 547 SUPERFAMILY WRKY DNA-binding domain 283 351 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed9g0705 547 MobiDBLite consensus disorder prediction 247 271 - -
Aed9g0705 547 MobiDBLite consensus disorder prediction 212 234 - -
Aed9g0705 547 MobiDBLite consensus disorder prediction 524 547 - -
Aed9g0705 547 MobiDBLite consensus disorder prediction 168 271 - -
Aed9g0705 547 Coils Coil 118 152 - -
Aed9g0705 547 PANTHER WRKY TRANSCRIPTION FACTOR 6 35 535 - -
Aed9g0705 547 ProSiteProfiles WRKY domain profile. 285 351 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed9g0705 547 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 35 535 IPR044810 GO:0003700
Aed9g0705 547 Gene3D WRKY domain 275 352 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0705 Aed-Chr9 4914499 4917154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0705 1 535 WRKY Transcription Factor Family AT1G62300 52.203 2.07e-154 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed9g0705 WRKY 6.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0705 - - gmx:100802124 788.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0705 9 4914499 4917154 Aed9g0705 9 4914499 4917154 ECH
Aed5g0725 5 5415831 5418497 Aed9g0705 9 4914499 4917154 ECH
Aed1g0948 1 9823918 9829989 Aed9g0705 9 4914499 4917154 ECH