Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0703 ATGGAGTGGACTAGAGGCCACACCCTCGGCCGGGGATCCACCGCTTCCGTCTACATCGCCGAGCCCCGCCGGTCCGGTCAAGTGTTCGCCGTGAAGTCGGTGGAGCTCCACCGCTCGGAGTTCCTCAAAAGGGAGGAGAGGATTCTTTCAACACTGAAATGTCCTCAAATTGTGGCCTACCAAGGTTGTGACATCACGTTCGAGAACGGCGTGCACTGGTTCAACATGTTCATGGAGTACGCGCCTCACGGGACGCTGGCGGAGCTCGGTGGCGGCATGGAAGAACCGGTGGTGGGGTCCTACACGCGCCAAATTCTGCAGGGGCTGAACTACCTTCACTCCAATGGGATAGTGCATTGCGACGTGAAGGGACAGAACGTGTTGGTGACGGAGAAAGGGGTGAAAATTGCGGACTTGGGCTGCGCTCGGAGGGTGGGGGAGTCGTCGGTGATCGCCGGCACGCCGGCGTTCATGGCGCCGGAGGTGGCGCGTGGGGAGCAGCAGGGGTTCCCCGCTGACGTGTGGGCTCTGGGGTGCACGGTGCTGGAGATGATCACCGGAAAGCCGCCGTGGCACGGGGGTGGGGACCCTGCGGCGGTGGTTTATAGGATTGGGTTCTCCGGCGAGGTGCCGGAGATTCCTAGTTTTGTGTCGGAGCAGGGGAGGGACTTTTTGGGAAAGTGTTTGAAGAGAGACCCCAGTGAGAGGTGGTCGGTGGAGGAGCTTCTTGGACACGGTTTTGTTAAGGAGTGCACGGAGTTGAAGTTGTTGGTGTCGGATTCGGACACTCCCACTTGTGTGTTGGAACGAGGTTTTTGGGATTCATTGGAGACAACTCAGCATGGTGCACGTGATTGTCCCTCTCCTAGGGACAGAATACGTAGGTTGTTTTCGGATGAACCCGTTTGGGCATGGAACGATGATGATGATGAGCAATGGGTCACGGTGAGAGGCAATGAGGTCCATCACACAACGGACACTACTTTTTGCAATGTCGTTAGTGATGAAGATAACTGTTTGGTAACTTTTTGTGAACCTAACACTGTAGTAGTTGAATTGAGTAGATGGAATGCTATTAGTGATGATGATGATTGTTATCTTAGAGACACGAGCATTCTTTCTAGAATTGCTACAACTACAAGGCTTGTTCTGTAA 1155 0.5472 MEWTRGHTLGRGSTASVYIAEPRRSGQVFAVKSVELHRSEFLKREERILSTLKCPQIVAYQGCDITFENGVHWFNMFMEYAPHGTLAELGGGMEEPVVGSYTRQILQGLNYLHSNGIVHCDVKGQNVLVTEKGVKIADLGCARRVGESSVIAGTPAFMAPEVARGEQQGFPADVWALGCTVLEMITGKPPWHGGGDPAAVVYRIGFSGEVPEIPSFVSEQGRDFLGKCLKRDPSERWSVEELLGHGFVKECTELKLLVSDSDTPTCVLERGFWDSLETTQHGARDCPSPRDRIRRLFSDEPVWAWNDDDDEQWVTVRGNEVHHTTDTTFCNVVSDEDNCLVTFCEPNTVVVELSRWNAISDDDDCYLRDTSILSRIATTTRLVL 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0703 384 CDD STKc_MAPKKK 2 248 - -
Aed9g0703 384 SMART serkin_6 3 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0703 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
Aed9g0703 384 ProSiteProfiles Protein kinase domain profile. 3 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0703 384 Pfam Protein kinase domain 4 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0703 384 SUPERFAMILY Protein kinase-like (PK-like) 3 280 IPR011009 -
Aed9g0703 384 Gene3D Transferase(Phosphotransferase) domain 1 2 284 - -
Aed9g0703 384 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 342 - -
Aed9g0703 384 PANTHER MAP KINASE KINASE KINASE 1 342 - -
Aed9g0703 384 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0703 Aed-Chr9 4900592 4902141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0703 1 366 MAP Kinase Kinase Kinase AT4G26890 46.015 1.95e-103 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aed9g0703 Pkinase 6.8e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0703 K20716 - gmx:100802174 634.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0703 9 4900592 4902141 Aed9g0703 9 4900592 4902141 ECH
Aed5g0726 5 5428965 5430059 Aed9g0703 9 4900592 4902141 ECH
Aed1g0946 1 9814355 9815545 Aed9g0703 9 4900592 4902141 ECH