Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0658 ATGAATCCTTTTGCTTATCCTGTGTCGTGCAAGGTCAAAGAATTTAGATCGAAGTCCATAAGAAGAGCTAGCATGGATCAAAACCAGCATGGTCAAGCAACACAAGTACATGGCAAGAACCAATATCAATATAACTCCATGATGGCACCTAGAGAGCAACAATATGCTCCTCAAGACATCTACCAGCCACAACTCAACAACTTTTGGGCAGAACAATGCCAGGAAATTGAGGAGAGCACTAATTTAAAGACTCACGACTTGCCTTTGGCTAGGATTAAGAAGATCATGAAGGCTAATGGAAATGTGAGGATGGTATCAGTTGAGGCTCCTTCGATGTTTGCTAAGGCTTGTGAAATGTTCATTATGGAGCTCACAGTGAAGGCTTGGGGTAATGTCGGGGATCACAAAAGAATGATACTTGAGAAGTGTGACATTGTATCTGCAATCTCAAAGACTAATGTGTTTGATTTTCTTGAGGATATTGTTCTCATGGATGCTGGCATACCAAAATCAATCACTGCTCCAACAAAGGATTTTGATCTAAATATGTTACCCTGTCAGAATGTTGCATACCCTCCAAATGATGCTCCAACAGAGGATTTTGATCTAAATATGACACCCCGTCAGAATGTTGCAGACCTTCCATGTGATGCTCCAACCGATGATTTTGATCTAAATATGCCACCTCGATAG 693 0.4113 MNPFAYPVSCKVKEFRSKSIRRASMDQNQHGQATQVHGKNQYQYNSMMAPREQQYAPQDIYQPQLNNFWAEQCQEIEESTNLKTHDLPLARIKKIMKANGNVRMVSVEAPSMFAKACEMFIMELTVKAWGNVGDHKRMILEKCDIVSAISKTNVFDFLEDIVLMDAGIPKSITAPTKDFDLNMLPCQNVAYPPNDAPTEDFDLNMTPRQNVADLPCDAPTDDFDLNMPPR 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0658 230 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 87 149 IPR003958 -
Aed9g0658 230 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA 32 169 IPR027170 GO:0003700|GO:0006355|GO:0016602
Aed9g0658 230 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 32 169 - -
Aed9g0658 230 Gene3D Histone, subunit A 47 163 IPR009072 GO:0046982
Aed9g0658 230 SUPERFAMILY Histone-fold 29 158 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0658 Aed-Chr9 4617010 4617702 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0658 65 162 CCAAT-HAP5 Transcription Factor Family AT1G56170 63.265 1.07e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Aed9g0658 CBFD_NFYB_HMF 9.7e-13 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0658 K08066 - gmx:100808341 237.654