Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0621 ATGGATCGACAATGTCGTGCTGCGTCCTTGTGGCCGCTATTGTTCTTAACGTTAATGTTCATTGTTGTTCTCGTTACGATGGACCACGCCTCAACTGGAATTTTTATATTTTTCGGATTCATATTGGGTTTGTTCCTATGGTATTGGATAGGAATGTTGCTTGTATTAGATCGTGACTGTGACAACAACGATGAGAGGAGGAGAGACATTGAGTCTAATCATCATTCACATACACACACTTCTTCTCTTTCTCTCCCTATAACGGCTACTGCCAGAGTGAGGGCTCAGAGCCAGAGGGAGCCTTGGCAAGACGTGCATCTGTTTTCTTTTGCACCGAGAGCGCACATTGCTAGGCTGTCCATGAGAGCCTTGCCTCCTGTCACGTGCTTTCGCGGCGCCGACGCCGACGGATCTGATCAACTTGATTGTCCTATTTGCATGGAAGATTTTGAAAATGGAGAGTTAATCCAACCTTTTGGAGTGTGTGTCCATGAATTTCACTCCTCGTGCGTTAACTCTTGGTTACTAGGTGGAAAAACTACTTGTCCAGTTTGTCGCAAGGAATTGTCAATTACTGTTGACTAG 585 0.453 MDRQCRAASLWPLLFLTLMFIVVLVTMDHASTGIFIFFGFILGLFLWYWIGMLLVLDRDCDNNDERRRDIESNHHSHTHTSSLSLPITATARVRAQSQREPWQDVHLFSFAPRAHIARLSMRALPPVTCFRGADADGSDQLDCPICMEDFENGELIQPFGVCVHEFHSSCVNSWLLGGKTTCPVCRKELSITVD 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0621 194 SUPERFAMILY RING/U-box 136 191 - -
Aed9g0621 194 PANTHER OS06G0666500 PROTEIN 97 190 - -
Aed9g0621 194 Pfam Ring finger domain 142 186 IPR001841 -
Aed9g0621 194 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 192 IPR013083 -
Aed9g0621 194 ProSiteProfiles Zinc finger RING-type profile. 143 186 IPR001841 -
Aed9g0621 194 SMART ring_2 143 185 IPR001841 -
Aed9g0621 194 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 97 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0621 Aed-Chr9 4315546 4316130 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0621 118 194 C3H Transcription Factor Family AT1G22670 38.961 1.41e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0621 - K15692 aprc:113865236 169.474