Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0607 ATGGACAATATCTACACTATGGTTTTTATACTTTTTCTATCTTTGAAGGCTAGTATTGGTGTGAGGAGAATATATAATAATGACAATGATGGTGATCATCTTGTGACTAACTTGCCTGGCCAGCCTCCTGTAGATTTCCAGCACTACGCTGGATATGTCACAGTGAACGAAACCAATGGTCGAGCACTCTTTTACTGGTTCTATGAAGCCATCACCAACCCTCAACACAAACCATTGGTGCTGTGGCTTAATGGAGGTCCTGGGTGCTCTTCTGTGGGATATGGAGCAACACAGGAGATTGGTCCATTTTTAGTGGACACCGATGGAAAGAGCCTTAAATTTAATAATTTCTCATGGAACAGAGAGGCCAACATGTTATTCCTGGAATCTCCTGTTGGGGTTGGCTTTTCCTATTCAAATACAACCACCGAATATGCACAACTGGGAGATGACTTCACAGCTAATGATGCTTACACTTTTCTGCACAATTGGTTCCTCAAGTTTCCATCATATAGAACAAGGACATTTTACATAGCAGGAGAGAGCTATGCAGGAAAGTATGTACCGGAGCTGGCTGAACTCATCCACGATAGAAACAAGGACCCTTCCCTTCACATTCATCTCAAGGGATTTTTGGTATTGGGAAACCCTGAAACATCTGATGCTGAGGACTGGTCAGGTATGGTTGATTATGCTTGGAGCCATGCAGTGATATCTGATGAAACATACAAAACAATCAAAGCAAGCTGTGACTTCAATAGCAGTGATCCTTGGAGTAACAAAGATTGTAGTGAAGGAGTGGATGAAACACTCAAACAGTACAATGAAATTGATATCTACAGCCTCTACACCTCTGTCTGCTTTGCTACTACGCGTTCTAACGATCAATCCATGCAAATGGTCATGAAACGCTCATCTAAAATGATGCCACGGATCATGGGAGGTTATGACCCATGTTTGGATGATTATGCAAAAACTTTTTATAATAGAGCAGATGTTCAGAAGGCACTCCATGCCAATGATGGTCACAATCTGAGGAATTGGAGTATTTGCAATGAAAACATATTCAAGGGGTGGGCACAATCAAAGCCTTCTGTTATCCCGATCTACAAGAAGCTTATTTCAGCAGGACTTAGGATTTGGGTTTACAGTGGAGACACTGATGGGAGGGTGCCAGTGCTGTCAACAAGATACAGCTTAAGTATTCTAGGTTTGCCTATCACTAAGAGATGGAGGCCTTGGTACCATGAAAAGGAGGTTAGTGGGTGGTATCAAGAATACTCGGGGCTTACGTTTGCGACATTTCGTGGAGCTGGGCATGCAGTGCCTTGTTTCAAACCAAGCAACTCACTCACATTCTTCTCCTCCTTTCTTCTTGGACAATCACCACCCTAG 1395 0.4287 MDNIYTMVFILFLSLKASIGVRRIYNNDNDGDHLVTNLPGQPPVDFQHYAGYVTVNETNGRALFYWFYEAITNPQHKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGKSLKFNNFSWNREANMLFLESPVGVGFSYSNTTTEYAQLGDDFTANDAYTFLHNWFLKFPSYRTRTFYIAGESYAGKYVPELAELIHDRNKDPSLHIHLKGFLVLGNPETSDAEDWSGMVDYAWSHAVISDETYKTIKASCDFNSSDPWSNKDCSEGVDETLKQYNEIDIYSLYTSVCFATTRSNDQSMQMVMKRSSKMMPRIMGGYDPCLDDYAKTFYNRADVQKALHANDGHNLRNWSICNENIFKGWAQSKPSVIPIYKKLISAGLRIWVYSGDTDGRVPVLSTRYSLSILGLPITKRWRPWYHEKEVSGWYQEYSGLTFATFRGAGHAVPCFKPSNSLTFFSSFLLGQSPP 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0607 464 Gene3D alpha/beta hydrolase 30 289 IPR029058 -
Aed9g0607 464 ProSitePatterns Serine carboxypeptidases, serine active site. 178 185 IPR018202 GO:0004185
Aed9g0607 464 Gene3D - 319 357 - -
Aed9g0607 464 Pfam Serine carboxypeptidase 39 459 IPR001563 GO:0004185|GO:0006508
Aed9g0607 464 PANTHER CARBOXYPEPTIDASE 26 462 - -
Aed9g0607 464 SUPERFAMILY alpha/beta-Hydrolases 31 461 IPR029058 -
Aed9g0607 464 Gene3D - 366 460 - -
Aed9g0607 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 430 443 IPR001563 GO:0004185|GO:0006508
Aed9g0607 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185|GO:0006508
Aed9g0607 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185|GO:0006508
Aed9g0607 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Aed9g0607 464 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 26 462 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0607 Aed-Chr9 4212062 4214695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0607 324 461 Calmodulin-binding Proteins AT2G22960 33.813 7.68e-16 73.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1937 10 23595804 23599950 Aed9g0607 9 4212062 4214695 PCT