Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0589 ATGACTTGTGGCTGCTTTGGAGCCAATTCTATAAAGGCAAGACGCCCTTCTTATGTTTCTGGTGAAATTGATGGCTATGCGCTAGATAATGTTAGGCAATTTTCTGATAAAGAATTGAGATTAGCAACTGATAATTATAATTCAAACAATAAGATAGGACGAGGAGGTTTTGGAACCGTTTACCAGGGAGCCTTAAGAGATGGAAGGCGTATAGCAGTGAAGACTCTCTCAGTTTGGTCAAAGCAGGGAGTTCGCGAATTTTTGACTGAAATTAAAACTTTGTCAAATGTTAAACATCCAAACCTTGTTGAATTGATTGGATTCTGCATTCAAGGACCTAGTCGTACATTAGTCTACGAGTATGTGGAAAATGGCAACCTTAATAGTGCCCTACTTGATTTGGTCAATTTATACTTGGATTATGGATTATGA 432 0.3796 MTCGCFGANSIKARRPSYVSGEIDGYALDNVRQFSDKELRLATDNYNSNNKIGRGGFGTVYQGALRDGRRIAVKTLSVWSKQGVREFLTEIKTLSNVKHPNLVELIGFCIQGPSRTLVYEYVENGNLNSALLDLVNLYLDYGL 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0589 143 PANTHER - 1 142 - -
Aed9g0589 143 Pfam Protein tyrosine and serine/threonine kinase 49 132 IPR001245 GO:0004672|GO:0006468
Aed9g0589 143 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 142 - -
Aed9g0589 143 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
Aed9g0589 143 ProSiteProfiles Protein kinase domain profile. 46 143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0589 143 SUPERFAMILY Protein kinase-like (PK-like) 14 135 IPR011009 -
Aed9g0589 143 Gene3D Phosphorylase Kinase; domain 1 20 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0589 Aed-Chr9 4101242 4105263 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0589 34 132 Receptor kinase-like Gene Family AT1G29750 53.535 7.42e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed9g0589 PK_Tyr_Ser-Thr 1.7e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0589 - - gmx:100809588 253.447