Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0564 ATGATCAGACACAAGAACACACACCACCCTCTTCTTCTCTTAATTCTCCTTCTTTTCAACTCAACATGTGCCATTGATTTTGTCTTCAACGGCTTCAACTCCTCTGAATCTGAATTGTTGCTCTTTGGCAACGCCACCATCGACTCTCGAATTCTAACACTCACCCACCAGCAAAGTTTTTCTGTCGGTCGTGCCCTGTACAATGAAAAAATCCCCACCAAGAAACCAAACTCTTCTCACGTGTACCCTTTCTCCACCTCTTTCATCTTCGCCATGGCACCTTTTGAAGACACTCTTCCGGGTCACGGCTTAGTTTTCATCTTCACACCTGTCACCGGCATCATCGGCACAAGTTCTGCGCAACACCTTGGTCTGTTCAACCTCACCAACAACGGAAACTCAAGTAACCACGTGTTTGGTGTAGAGTTCGACGTGTTCTCGAACCAAGAGTTCGATGACATCAACGCCAACCATGTCGGGATTGACATAAACTCTCTTAAATCCAATGTTTCCCATGATGCTGGGTATTGGCCAGATGCTGCTGCTGGTGACACGTCCTTTAAGAAATTGACGCTTAACAGTGGTGACAATTACCAAGTATGGATTGACTATGAAGATTCTTGGATTAATGTTACCATGGCACCCGTGGGTATGAAAAGGCCTAGCAGGCCTTTGTTGAATGTTTCTCTCAACTTATCTCAGGTTTTCGAGGATGAAATGTTTGTTGGGTTTACTAGTGCCACTGGCCAATTAGTTGAGAGTCATAAGATTTTGGGGTGGAGTTTCAGCAATGATAACTTTTCGTTAAGTGATGAACTCGTTACTACTGGGTTACCTTCTTTTGTTCTTCCAAAAGATTCAATTTTTAAGTCCAAGGGGTTTGTTGCAGGGTTTACTGTGGGAGTTTTCTTCGTTATTTGTCTCTTGGTTTTGTTGGCACTGTTTTTGATTCAAAGGAAGCGTATGAAAGATAGGAAGAGGCTGGAAATGGAAGATTGGGAGTTGGAGTATTGGCCACACAGAATGGCATATGAAGAAATAGAGGCAGCAACAAAGGGTTTCTCTGAGGAGAATGTGATAGGGGTTGGTGGGAATGGGAAAGTCTACAAGGGTGTTCTACGAGGAGGGGTGGAGGTTGCTGTGAAGCGCATTTCTCATGAAAATGATGGTCTTCGAGAATTTCTTGCTGAAGTTTCAAGCCTTGGGAGACTGAAGCAAAGGAATTTGGTGGGGTTGAGAGGTTGGTGCAAGAAAGATGTTGGGAATTTCTTGTTAATTTATGACTACATGGAAAATGGGAGCTTGGACAAGAGGGTGTTTGATTGTGATGAGAGCAAGATGTTAAGTTACGAAGACAGAATAAGGATTATTAAAGATGTGGCTTTTGCAGTGTTGTACTTGCATGAAGGGTGGGAAGCTAAGGTTGTGCATAGGGACATCAAGGCAAGCAATGTTTTACTTGATAAGGATATGAATGGAAGGCTTGGGGATTTTGGGTTAGCCAGGATGCACAGCGATGGTCAAGTTGCTAGCACCACAAAATTGGTTGGAACAGTTGGTTACATGGCTCCTGAAGTGATCAAGACTGGAAGAGCTTCCACTCAGACAGATGTTTACATGTTTGGCATCTTGATTTTAGAGGTATTGTGTGGAAGGAGACCTTTAGAAGAGGGTAAGGTACCTTTGGTGGAGTGGGTTTGGAACCTAATGGTACAAGGGCAACTTGAGGGTGCACTTGATGAAAGGCTAAGGGCCAAGGGAGAGTTCAATGTGCAAGAATTGGATAGTGTGATGCACTTGGGTTTGTTGTGTGCCTACCCTGAACCAAAGACCAGACCCACAATGAGACAAGTGGTGAATGTTTTAGAGGGGAAGAATGAGGGAGAGGAATCAGAAATTGAGAATATGGGTACCTATTTGCTCCAACAGTTGAGATCTAGGGATATTTTATCTGAATATTCTCAGTATTTTAGCTATACGTCACACCCAACTTTCCAAGATATTCGTCTCTCTTCCTCAATGTCTCTCACATGGTCCGAATCTGTAGTTGAGGGTAGGTGA 2061 0.4367 MIRHKNTHHPLLLLILLLFNSTCAIDFVFNGFNSSESELLLFGNATIDSRILTLTHQQSFSVGRALYNEKIPTKKPNSSHVYPFSTSFIFAMAPFEDTLPGHGLVFIFTPVTGIIGTSSAQHLGLFNLTNNGNSSNHVFGVEFDVFSNQEFDDINANHVGIDINSLKSNVSHDAGYWPDAAAGDTSFKKLTLNSGDNYQVWIDYEDSWINVTMAPVGMKRPSRPLLNVSLNLSQVFEDEMFVGFTSATGQLVESHKILGWSFSNDNFSLSDELVTTGLPSFVLPKDSIFKSKGFVAGFTVGVFFVICLLVLLALFLIQRKRMKDRKRLEMEDWELEYWPHRMAYEEIEAATKGFSEENVIGVGGNGKVYKGVLRGGVEVAVKRISHENDGLREFLAEVSSLGRLKQRNLVGLRGWCKKDVGNFLLIYDYMENGSLDKRVFDCDESKMLSYEDRIRIIKDVAFAVLYLHEGWEAKVVHRDIKASNVLLDKDMNGRLGDFGLARMHSDGQVASTTKLVGTVGYMAPEVIKTGRASTQTDVYMFGILILEVLCGRRPLEEGKVPLVEWVWNLMVQGQLEGALDERLRAKGEFNVQELDSVMHLGLLCAYPEPKTRPTMRQVVNVLEGKNEGEESEIENMGTYLLQQLRSRDILSEYSQYFSYTSHPTFQDIRLSSSMSLTWSESVVEGR 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0564 686 Pfam Legume lectin domain 25 266 IPR001220 GO:0030246
Aed9g0564 686 ProSiteProfiles Protein kinase domain profile. 354 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0564 686 ProSitePatterns Protein kinases ATP-binding region signature. 360 382 IPR017441 GO:0005524
Aed9g0564 686 Gene3D Phosphorylase Kinase; domain 1 316 429 - -
Aed9g0564 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Aed9g0564 686 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 272 IPR013320 -
Aed9g0564 686 SUPERFAMILY Protein kinase-like (PK-like) 334 623 IPR011009 -
Aed9g0564 686 Pfam Protein kinase domain 355 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0564 686 Gene3D - 23 265 - -
Aed9g0564 686 Gene3D Transferase(Phosphotransferase) domain 1 430 643 - -
Aed9g0564 686 PANTHER - 6 677 - -
Aed9g0564 686 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 6 677 - -
Aed9g0564 686 SMART serkin_6 354 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0564 686 CDD STKc_IRAK 360 624 - -
Aed9g0564 686 CDD lectin_legume_LecRK_Arcelin_ConA 25 263 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0564 Aed-Chr9 3940647 3942707 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0564 20 570 Receptor kinase-like Gene Family AT4G04960 68.829 0.0 743
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aed9g0564 Pkinase 7.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0564 - - gmx:100804391 1213.36