Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0561 ATGGGGGAAGATGGTAATTCTTGGCTTAGGAGGACAAAGTTTTCACACACAGTGTGCCATCGTTTGGATCCTGCTAGATTAGGCGTTATTCCTATCATCGTTCAGCCAGACCAAAAACAAAAACAAAAATCGAGGCCTGCCTCAAAGGTCCAGAGAAACCTCATAACAAACAAGCAGAGATCTTTGTCACCATTGCCTGATACTTATCTTTCTGAGATCTTCAGGGAAGCTAGAGATGAACAGAAGAGGTTCTCCACACCGAACTCCCGGAGGGATAACAGGATTATGGGGAAGGTGTTGAACAAGGATTCTCCGGAGACTATTATGGAATCAAGTTCAAGGTTTTCCCGTAGTCCAAAAAGGCTTGTGAAGTCGAAGCAACGCAGGGATTCATCATGGACTAACCTTTTGGATGGTAATGGCGGAGGAAAGATTAGTGCTGTGGAAACAGCTGAAGAGTGGAATATTGACATGTCTCAATTGTTTATTGGCCTCAAGTTTGCTCATGGGGCTCACAGTCGACTTTACCATGGTGTATATAAGGATGAGACTGTTGCTATTAAAATCATTATGGTACCTGAGGATGATGAAAATGGAGCTTTGGCTTCTCGATTAGAGAAACAGTTCGTTAGAGAAGTCACCCTTTTATCTCGTCTTCACCATCAAAATATTCTCAAGTTCTCAGCAGCATGCAGAAAGCCACCGGCTTATTGTGTTATCACAGAATATCTGGCGGAAGGTTCCTTGAGGGCATATATTCATAAATTGGAGCACCAAACTATGTCTCTACAAAAGCTATTAGCTTTTGCTCTGGATATTGCTCGCGGAATGGAATATATACATTCTCAAGGTGTCATTCATCGAGACCTTAAACCAGAGAATATCCTTCTCAATAAAGACTCACACCTTAAAATTGCTGATTTTGGCATTGCTTGTGAGGAAGCATCTTGTGACTTATTGGCTGATGACCCTGGCACCTACCGTTGGATGGCACCGGAGATGATCAAACGTAAATCCTATGGGAGGAAGGTTGATGTCTACAGTTTTGGGCTTATCTTATGGGAGATGTTGACTGGAACGACACCATATGAGGATATGATTCCAGTACAGGCTGCTTTTGCAGTAGTAAATAAGAATGCAAGGCCAGCTATTCCCTCAAACTGTCCACCTGCTATGCGAGCTCTAATTGAGCAATGTTGGAGCTTGCAACCAGACAAGAGGCCTGAGTTCTGGCAGGTTGTTAAGGTATTAGAGGAATTTGAATCTTCACTTGCCCGTGATGGAACCTTGACTCTGGTGCCAAGCCCTTCTTGGGATAATAAGAAAGGGCTTCTTCATTGGATTCAAAAGCTTGGTCCCGTGCACCAAAATACTGGTCCTGTGCCTAAACCCAAATTCACATGA 1404 0.4345 MGEDGNSWLRRTKFSHTVCHRLDPARLGVIPIIVQPDQKQKQKSRPASKVQRNLITNKQRSLSPLPDTYLSEIFREARDEQKRFSTPNSRRDNRIMGKVLNKDSPETIMESSSRFSRSPKRLVKSKQRRDSSWTNLLDGNGGGKISAVETAEEWNIDMSQLFIGLKFAHGAHSRLYHGVYKDETVAIKIIMVPEDDENGALASRLEKQFVREVTLLSRLHHQNILKFSAACRKPPAYCVITEYLAEGSLRAYIHKLEHQTMSLQKLLAFALDIARGMEYIHSQGVIHRDLKPENILLNKDSHLKIADFGIACEEASCDLLADDPGTYRWMAPEMIKRKSYGRKVDVYSFGLILWEMLTGTTPYEDMIPVQAAFAVVNKNARPAIPSNCPPAMRALIEQCWSLQPDKRPEFWQVVKVLEEFESSLARDGTLTLVPSPSWDNKKGLLHWIQKLGPVHQNTGPVPKPKFT 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0561 467 PANTHER TYROSINE KINASE FAMILY PROTEIN 3 444 - -
Aed9g0561 467 Gene3D Transferase(Phosphotransferase) domain 1 245 431 - -
Aed9g0561 467 ProSiteProfiles Protein kinase domain profile. 134 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0561 467 SUPERFAMILY Protein kinase-like (PK-like) 148 417 IPR011009 -
Aed9g0561 467 SMART serkin_6 161 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0561 467 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 3 444 - -
Aed9g0561 467 Gene3D Phosphorylase Kinase; domain 1 149 244 - -
Aed9g0561 467 MobiDBLite consensus disorder prediction 36 63 - -
Aed9g0561 467 MobiDBLite consensus disorder prediction 37 63 - -
Aed9g0561 467 Pfam Protein tyrosine and serine/threonine kinase 166 417 IPR001245 GO:0004672|GO:0006468
Aed9g0561 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
Aed9g0561 467 PRINTS Tyrosine kinase catalytic domain signature 388 410 IPR001245 GO:0004672|GO:0006468
Aed9g0561 467 PRINTS Tyrosine kinase catalytic domain signature 325 335 IPR001245 GO:0004672|GO:0006468
Aed9g0561 467 PRINTS Tyrosine kinase catalytic domain signature 344 366 IPR001245 GO:0004672|GO:0006468
Aed9g0561 467 PRINTS Tyrosine kinase catalytic domain signature 241 254 IPR001245 GO:0004672|GO:0006468
Aed9g0561 467 PRINTS Tyrosine kinase catalytic domain signature 279 297 IPR001245 GO:0004672|GO:0006468
Aed9g0561 467 MobiDBLite consensus disorder prediction 106 129 - -
Aed9g0561 467 CDD STKc_MAP3K-like 168 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0561 Aed-Chr9 3922069 3925902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0561 1 467 MAP Kinase Kinase Kinase AT5G58950 52.264 0.0 551
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Aed9g0561 PK_Tyr_Ser-Thr 6e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0561 - - gmx:547826 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1887 10 23173449 23177494 Aed9g0561 9 3922069 3925902 PCT